Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3600 ATGTTGCAGGAAGAACAACCACAAGAAATAAAGAAAAAGCCGAAGTTCAAAATCAAATATACAGGGAAGCCAAAAAATGAGTCCAAGTTTAAAAAGGGAGAAATAGTTGAAGTTAGCAGTGATGAAGAAGGTTATAAAGATGCTTGGTTTGTTGCTACCATTGTTGACATAATAGAAAAAGAGAGGTTTCTTGTTGAATATAGAGACTTGTTGATGAATGATGATAACACTCAACACTTGAAAGAAGAAATTGATGCTAAGTTTATTAGGCCATGTCCCCCTCAAATTCCAATTTATGGTTCATTCAGAAAGTTACAAGATGTTGATGCATGGTACAATGATGCATGGTGGGAAGGCATGGTTGTTGAATTAATGAATAAAACTGAGTGTTTTGTTCAATTTATGAACAATGAGCTATTGAAATTTGAATCTTCAAAGTTAAGGCCTCGGCAGAATTGGATCGATGGAAAATGGGTCATGTCTTCCGAGGTTGATGTTTGGTATAACGATGGATGGTGGGAAGGTGAAGTATCTAGCGTTGGTCATGGTTTAAATGGTTTCGAGTATAAGATTTACTTTTGGACTTCAAATGAGGAATTGGAATTTCAACATGATTATTTGAGGCATCATCAAGAATGGATTGATGGAAGATGGGTGCTTGCTTCTTTGGGTTGA 675 0.36 MLQEEQPQEIKKKPKFKIKYTGKPKNESKFKKGEIVEVSSDEEGYKDAWFVATIVDIIEKERFLVEYRDLLMNDDNTQHLKEEIDAKFIRPCPPQIPIYGSFRKLQDVDAWYNDAWWEGMVVELMNKTECFVQFMNNELLKFESSKLRPRQNWIDGKWVMSSEVDVWYNDGWWEGEVSSVGHGLNGFEYKIYFWTSNEELEFQHDYLRHHQEWIDGRWVLASLG* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3600 224 Gene3D - 18 102 - -
Mal4g3600 224 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 164 222 - -
Mal4g3600 224 PANTHER AGENET DOMAIN-CONTAINING PROTEIN 2 163 - -
Mal4g3600 224 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 164 222 - -
Mal4g3600 224 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 2 163 - -
Mal4g3600 224 SMART agenet_At_2 100 155 IPR014002 -
Mal4g3600 224 SMART agenet_At_2 28 97 IPR014002 -
Mal4g3600 224 SMART agenet_At_2 156 215 IPR014002 -
Mal4g3600 224 Pfam Agenet domain 33 94 IPR008395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3600 Mal-Chr4 106356807 106358598 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3600 40 173 PHD Transcription Factor Family AT5G58610 25.466 1.16e-07 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3600 - - mtr:MTR_2g033390 247.669