Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3585 ATGGAAGCATATGGCGGTTACGTGGTGGACAAGAAACACTATTATAAAGAAGAGATAGAAGTGATGATAAGCAATGAGTCAAATACCATGTTCATCGATTTCGAACATGTCATGAAATTCAGTGATGTTTTACAGAAAGCAATCTCTGATGAATATTTGAGTTGTAAGAGGTTTGTCATGGATGTGAAACCAACATACATATCTGAGGATAGCCCTTACAAGGACATCAACATTGCCTTCTACAACATTCCAGTTGTGAAACGGTTAAGGGAGTTGACTACATCAGACATTGGAAAGCTTGTATCTGTGACAGGAGTTGTAACAAGGACAACCGAGGTTCAACCTGAGCTTCTCAAAGGGACATTCAAATGTCTAGAATGTGGTGGAGTTATAAAGAATGTTGAACAACAGTTCAAGTATACTGAGCCAACGATCTGTCCAAATGTAACCTGTATGAATCGAACAAAGTGGGCACTGCTGCGCGAAGAGAGCAAATTTACTGATTGGCAAAAGGTCAGAATACAGGAGACATCCAAAGAGATACCTGCAGGCTGTTTGCCTAGGTCATTAGATGTTATTCTTCCGATTTTTATGGGCACTGTAGTTGTTATATCTAATATATTGGCATTGGCGAGCCCTGGAGAGAGGTCAGAATGCCGTCAAGAAGCTTCTCAACGCAGGGGTTCTACACCTGGAAATGAAGGTGTGAGGGGCCTTAAGGCTTTCGGAGTCAGAGATCTCTCCTATCATCTAGCTTTTATTGCAAACTCTGTTCAGGGTAAGGCTGCGTACAATACACCAAAATGGTGGGACCCCTTTCCAGACCCTGCGTATGCGGGAGCTTTAGTGCACCGGGCTGCTCTTACCATATCAGTGTATACATCTGGGAAATCATCATCTGCCGCCGGCTTGACTGCAACTGTTGCTAAGGAACCAGAAACTGGGGAGTTTTGTATTGAGGCTGGCGCTTTGATGCTTGCTGACAATGGCATTTGCTGTATCGATGGATTTGACAAGATGGACATCAAAGATCAGGTTGCAATTCACGAGGCCATGGAACAGCAGACTATTAGTATCACAAAAGCAGGAATACAAGCAACACTTAATGCCCGTACTTCCATTCTTGCCGCTGCCAATCCTGCTGGAGGGCGATATGATAAGTCTAAATCACGGAGGTACAATGTGGCTCTTCCACCAGCTATACTTTCTAGGTTTGATCTTGTATACGTTATGGTTGATGACCCGGATGAAACAATAGATGCCAACATAGCTCAACATATCGAGAAAGTTCATCAAAAGCGTGATGATGCTCTTGATCCAGCATTCACCACAGCAGAACTAAAGCGTTACATTGCCTATGCAAAAACTCTCAAACCAACGCTCACGTCAGATGCCAGAACACGACTTGTAAACTCTTATGTTGCTTTCCGTAGGAGTGATACATATCATATGACAGTAAGGCAGTTGGAGGCGTTAATCAGGCTGTCGGAGGCCACTGCACGGATACATTTGGAAAATCAGGTGAAACTTCATCATGTTCGTGAAGCAGAAATAATGCTTAAAATATCCATAATAAGAGTGGAGTTCGGTGAGATTGATCTGTCTGAGTTTCAAGAACCAAGCAGGGAGGACACTGCAGAAAGTCCAGCAGATGATGGATCTGACCACCAAGGGAAGAAAATTACTGTAAGTTATGAAAAATTTCAGAGGATTACTAGGAATGTGGAGCGCTTTAGGCAGCAAGAAGAGACTGTGGCGCGAGAAGGAACTGGTTTGTCGGGGATGAAGCAACGAGATTTGATTAAATGGTATGTAGAACTGCGAAATGAGAAAAATAAATACAGGTCTATGGAGGACGCGGTGCAAGAAGTTAGCGAAATTAAAGCAATTATAGAGAGCTTAGTTCGAAGAGAGGGAGATTTGATAGTGGTAGATGATGGTAGGCAAGCAGCAGCAGAAGCTGCGGGTGCAGAGCACTCCGCATCCGTGTCCATAAATGATCGAATTTTAGTTGTCGCTCCCAATTACTCCCTCTAA 2037 0.435 MEAYGGYVVDKKHYYKEEIEVMISNESNTMFIDFEHVMKFSDVLQKAISDEYLSCKRFVMDVKPTYISEDSPYKDINIAFYNIPVVKRLRELTTSDIGKLVSVTGVVTRTTEVQPELLKGTFKCLECGGVIKNVEQQFKYTEPTICPNVTCMNRTKWALLREESKFTDWQKVRIQETSKEIPAGCLPRSLDVILPIFMGTVVVISNILALASPGERSECRQEASQRRGSTPGNEGVRGLKAFGVRDLSYHLAFIANSVQGKAAYNTPKWWDPFPDPAYAGALVHRAALTISVYTSGKSSSAAGLTATVAKEPETGEFCIEAGALMLADNGICCIDGFDKMDIKDQVAIHEAMEQQTISITKAGIQATLNARTSILAAANPAGGRYDKSKSRRYNVALPPAILSRFDLVYVMVDDPDETIDANIAQHIEKVHQKRDDALDPAFTTAELKRYIAYAKTLKPTLTSDARTRLVNSYVAFRRSDTYHMTVRQLEALIRLSEATARIHLENQVKLHHVREAEIMLKISIIRVEFGEIDLSEFQEPSREDTAESPADDGSDHQGKKITVSYEKFQRITRNVERFRQQEETVAREGTGLSGMKQRDLIKWYVELRNEKNKYRSMEDAVQEVSEIKAIIESLVRREGDLIVVDDGRQAAAEAAGAEHSASVSINDRILVVAPNYSL* 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3585 678 Gene3D - 116 167 - -
Mal4g3585 678 Gene3D - 6 85 - -
Mal4g3585 678 ProSiteProfiles MCM family domain profile. 291 427 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 Pfam MCM6 C-terminal winged-helix domain 559 677 IPR041024 -
Mal4g3585 678 MobiDBLite consensus disorder prediction 538 559 - -
Mal4g3585 678 Pfam MCM P-loop domain 288 431 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 290 524 IPR027417 -
Mal4g3585 678 Pfam MCM AAA-lid domain 446 521 IPR041562 -
Mal4g3585 678 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 289 628 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 SUPERFAMILY Nucleic acid-binding proteins 10 194 IPR012340 -
Mal4g3585 678 Pfam MCM OB domain 89 194 IPR033762 -
Mal4g3585 678 PANTHER DNA REPLICATION LICENSING FACTOR MCM6 20 260 - -
Mal4g3585 678 PANTHER DNA REPLICATION LICENSING FACTOR MCM6 289 628 - -
Mal4g3585 678 Gene3D - 557 678 - -
Mal4g3585 678 Gene3D - 89 194 IPR012340 -
Mal4g3585 678 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 20 260 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 Coils Coil 607 637 - -
Mal4g3585 678 SMART mcm 85 525 IPR031327 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 86 98 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal4g3585 678 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 235 256 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal4g3585 678 PRINTS Mini-chromosome maintenance (MCM) protein 6 signature 136 153 IPR008049 GO:0003677|GO:0003678|GO:0005524|GO:0005634|GO:0006270|GO:0042555
Mal4g3585 678 Gene3D - 278 529 IPR027417 -
Mal4g3585 678 PRINTS Mini-chromosome maintenance (MCM) protein family signature 374 386 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 PRINTS Mini-chromosome maintenance (MCM) protein family signature 401 409 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 PRINTS Mini-chromosome maintenance (MCM) protein family signature 350 363 IPR001208 GO:0003677|GO:0005524|GO:0032508
Mal4g3585 678 PRINTS Mini-chromosome maintenance (MCM) protein family signature 322 336 IPR001208 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3585 Mal-Chr4 105734116 105739259 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3585 278 676 Core DNA Replication Machinery Family AT5G44635 57.709 1.10e-152 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3585 K02542 - zju:107405603 526.168