Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3573 ATGAAGATATCAACACTTTTTTTTCTCTTATGCTTCTTCTCTTGTGTTCTATTAGTCCTTTGTCATGATAATGAAATAACCACTTTGAAAGTGCTTTTAGAGGTGAAATCATCTTTTCTGAAAGACCCTGAAAATGTTCTTAGTAATTGGTCTGAAAACAACACTGATTATTGTACTTGGAAAGGTGTTTCATGTGACTCGGTGAGTCGTAACGTAGTTGGACTCGATCTGTCCAACTCGCAACTCACCGGGTCAATATCACCTTCACTCGGTCTTTTACAAAACCTAACCCACCTTGATCTTTCATCAAACCATATTGTGGGTCCCATTCCATCTTCACTCTCCAATCTCACTAAATTAGAATCTTTGCTTGTGTTCTCCAACCAACTAACGAGCCAAATTCCTGCTGATTTTGGCTCGTTACTCAGCCTCCGAGTTTTGCGACTCGGAGACAATAATCTTATTGGCGAAATTCCTGCTTCATTAGGGAATTTGGCCAACCTTGTCACCCTTGGTTTAGCATCATGCAAACTCACCGGTTCAATTCCGAGTCAACTCGGTCGACTCAGTAAGTTACAGAATCTTATTCTTCAAGACAACGAGTTAACCGGTTCGGTTCCGTCCGAGTTAGGTAACTGTTCAAGCCTCATCAACTTCACTGCAGCTGAAAACAAACTCAATGGAACAATCCCAAGTGAACTGAGTCAACTCAGAAACCTTGAAGTTCTCAACCTTGCAAACAATACCTTAACAGGTGAAATACCGAGTCAACTCGGTGAAATGAGTAAACTCAATTATCTCAATGTGATGGAAAACAAACTCGAGGGTCACATTCCAATGTCTTTATTTCAATTGGGTAACCTTGAAAATCTTGACTTGTCAATGAACAAATTCTCTGGAGGAATTCCAAAAGTGTTTACAAACATGTCTATGTTGAAATACTTAGTTCTTTCTGGTAACCCTTTATATGGAAATATTCCAAAAACTTTATGTTCCAGTGCTACAAATTTGGAGCATTTAATGATATCAATGAGTGGACTATATGGTGAAATTCCATCTGAGTTGAGTCAATGTAAATCATTGAAGCAAATTGATTTATCAAACAATTCTCTCAATGGGACAATACCTCTTGAGATTTATGGTTTGGTGAATTTAACTGATATTTTGCTTCACAACAATAGTTTGGTTGGTTCAATTTCACCTTTCATAGGGAATTTGAGTAACATGCAAACACTTGCATTGTATCATAACAAGTTGCAAGGTCCTTTGCCTAAAGAGATTGGAAGGCTTGGAAAGTTGGAAATTTTGTATCTTTATGATAATCAATTTTCTGGGGAGATACCTATGGAGATTGGTAATTGTTCAGAATTGCAAATGGTTGATTTATTTGATAACCATTTTGGTGGAAGAATTCCAATCACTATTGGAAGGTTGAAAAAGTTGAGTTTTCTTCATCTTAGGCAAAATGAGCTTGTTGGTGAGATTCCAGCTACACTTGGGAATTGTCATAAGCTGAATGTGCTTGATTTGGCTGATAATAAGCTTTCTGGTGGAATTCCTGCAACATTTGGTTACCTCAAAGCATTGAAGCTGTTTATGCTTTACAACAATTCTCTTGAAGGTGGTATTCCTCGGCAAATGGTGAATGTAGCAAATTTGACAAGAGTTAATCTTTCAAAGAACAGGTTGAATGGAAGTTTGGTTCCATTGTGTAGCTCTTCGGAGTTTCTTTCTTTTGATGTCACAGGTAATGCATTTGATGGTGAAATTCCTTCAAACTTAGGAAACTCTTTGTCTCTTGGGAGGCTAAGATTAGGTGGTAACAAGTTTTCTGGTGAAATTCCGAGGACTTTGGGAAAAATCGCTGAATTGTCTTTGTTAGACCTCTCGGGTAATTCACTCATAGGACCAATACCAGGTGAACTATCTTTGTGTAACAAACTAGCCTCTGTTGATTTAAGCAATAATCTTCTTGTTGGTCACATACCATCATGGCTTGGAAATTTGCCTAAGTTAGGAAAGCTTAATCTTGCCTTCAATCAATTTTCAGGGCCTTTTCCATTAGGCCTATTCAAATTACCTATGTTGTTGGTTCTTTCCTTGAATAACAATTCTCTTAGTGGAAGTCTCCCCGATGGTATCGGCGATCTTGAATCGCTTAATGTCCTAAGACTTGACAGTAATAATTTTAGTGGACCAATCCCTCATGCAATAGGTAAGTTGAGAAATCTTTATGAGCTTAATCTATCTAGAAATGTCTTTAGTGGTGACATACCAAATGAGATTGGAAATCTTCAGAATCTCCAAGTCGGTTTAGACCTCGGTTACAATAATCTCTCTGGTCAGATTCCATCTTCTCTTGGCACGTTGGCGAAATTGGAAGCACTTGATCTATCTCACAATCAACTCACAGGAGAAGTTCCTTCAATCGTTGGTGAAATGATTAGCTTGGAAAAGCTCAATATCTCTTATAATAACTTTCAAGGCGCATTGGATAAGTGGTTCTCCCGCTGGCCGTACGAGGCGTTTGTCGGAAACCTTCGTCTTTGTGGAGCCTCTCTTGGTAGCTGCAACCATGGTGGTGCTTCCCGAAATAAGCTATCGGGGTTAAGTGAGAAATCAGTGATTATAATCTCTGCCATTTCCACTCTGGCTGCAATTGCACTACTTGTTCTGGCAGTGAAAATCTTCTTGAGAAATAGGCAAGAACTTTTGAAGAAGGACAGCGAGTTAGCCTGTGTTTTCTCCTCCTCTTCGTCACAAGTGCAGAAAAGACCATTGTTCCCTGTAAGTACAGGTGGACGGCAAGAATTCAGGTGGGAAGAGATCATGGATGCTACAAACAATTTGAGTGATGAGTTCATAATCGGTTCTGGAGGTTCCGGAACTGTCTACAGAGTTGAATTGCCTACCGGCGAGACTGTTGCTGTCAAGAAGATTTCATTGAAAGACGAATATCTGTTGCATAAAAGCTTTATAAGAGAAGTAAAGACTTTAGGGAGGATTAAGCATAGACATTTGGTGAAACTGATTGGTTGTTGTAGCAATAGACACAAAGGAAATGGTTGCAATCTGTTGATATATGAGTTCATGGAGAATGGAAGTGTTTGGGATTGGTTACATGGAAATGCTCTCAAGTTAAAGAGAAGCCTTGATTGGGACACAAGGTTCAAAATTGCTTTGGGGTTGGCTCAAGGAGTGGAGTACCTTCATCATGATTGTGTGCCAAAGATCATTCATAGAGATATCAAATCCAGCAATATATTGTTAGATTCCAATATGGATGCACACTTGGGAGATTTTGGATTGGCAAAAGCAATCGTTGAGAGTCTTGACTCTAATACCGAGTCTACTTCTTGTTTTGCAGGGTCTTATGGTTACATAGCTCCAGAGTTTGGATACTCTTTGAAGGCAACAGAGAAAAGTGATGTATACAGCATGGGAATTGTGCTTATGGAACTTGTCAGTGGTAAATTGCCAACTGATGCAGCATTTAGAGGAGGTATAGACATGGTGAGATGGGTGGAGATGCATATTGACATGAAAGGAACCGAACGTGACGAGGTCATCGATCCTGAGCTCAAACCTCTTTTACCTTATGAAGAGTTTGCTGCATTTCAAGTGCTTGAGATAGCTTTACAGTGCACAAAAACTACACCAATGGAGAGGCCATCATCAAGGCAAGTTTGTGATCTTCTTCTACATGTGTCCAAGAATAAAAAAGTGGAGTTTGAGAAGATGAAGTTGGATTCTTACAACTGA 3762 0.3929 MKISTLFFLLCFFSCVLLVLCHDNEITTLKVLLEVKSSFLKDPENVLSNWSENNTDYCTWKGVSCDSVSRNVVGLDLSNSQLTGSISPSLGLLQNLTHLDLSSNHIVGPIPSSLSNLTKLESLLVFSNQLTSQIPADFGSLLSLRVLRLGDNNLIGEIPASLGNLANLVTLGLASCKLTGSIPSQLGRLSKLQNLILQDNELTGSVPSELGNCSSLINFTAAENKLNGTIPSELSQLRNLEVLNLANNTLTGEIPSQLGEMSKLNYLNVMENKLEGHIPMSLFQLGNLENLDLSMNKFSGGIPKVFTNMSMLKYLVLSGNPLYGNIPKTLCSSATNLEHLMISMSGLYGEIPSELSQCKSLKQIDLSNNSLNGTIPLEIYGLVNLTDILLHNNSLVGSISPFIGNLSNMQTLALYHNKLQGPLPKEIGRLGKLEILYLYDNQFSGEIPMEIGNCSELQMVDLFDNHFGGRIPITIGRLKKLSFLHLRQNELVGEIPATLGNCHKLNVLDLADNKLSGGIPATFGYLKALKLFMLYNNSLEGGIPRQMVNVANLTRVNLSKNRLNGSLVPLCSSSEFLSFDVTGNAFDGEIPSNLGNSLSLGRLRLGGNKFSGEIPRTLGKIAELSLLDLSGNSLIGPIPGELSLCNKLASVDLSNNLLVGHIPSWLGNLPKLGKLNLAFNQFSGPFPLGLFKLPMLLVLSLNNNSLSGSLPDGIGDLESLNVLRLDSNNFSGPIPHAIGKLRNLYELNLSRNVFSGDIPNEIGNLQNLQVGLDLGYNNLSGQIPSSLGTLAKLEALDLSHNQLTGEVPSIVGEMISLEKLNISYNNFQGALDKWFSRWPYEAFVGNLRLCGASLGSCNHGGASRNKLSGLSEKSVIIISAISTLAAIALLVLAVKIFLRNRQELLKKDSELACVFSSSSSQVQKRPLFPVSTGGRQEFRWEEIMDATNNLSDEFIIGSGGSGTVYRVELPTGETVAVKKISLKDEYLLHKSFIREVKTLGRIKHRHLVKLIGCCSNRHKGNGCNLLIYEFMENGSVWDWLHGNALKLKRSLDWDTRFKIALGLAQGVEYLHHDCVPKIIHRDIKSSNILLDSNMDAHLGDFGLAKAIVESLDSNTESTSCFAGSYGYIAPEFGYSLKATEKSDVYSMGIVLMELVSGKLPTDAAFRGGIDMVRWVEMHIDMKGTERDEVIDPELKPLLPYEEFAAFQVLEIALQCTKTTPMERPSSRQVCDLLLHVSKNKKVEFEKMKLDSYN* 1254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3573 1253 Pfam Leucine rich repeat 742 803 IPR001611 GO:0005515
Mal4g3573 1253 Pfam Leucine rich repeat 263 322 IPR001611 GO:0005515
Mal4g3573 1253 Pfam Leucine rich repeat 504 563 IPR001611 GO:0005515
Mal4g3573 1253 Gene3D Ribonuclease Inhibitor 281 350 IPR032675 -
Mal4g3573 1253 Gene3D Ribonuclease Inhibitor 360 524 IPR032675 -
Mal4g3573 1253 Gene3D Ribonuclease Inhibitor 525 860 IPR032675 -
Mal4g3573 1253 SUPERFAMILY L domain-like 301 586 - -
Mal4g3573 1253 PRINTS Leucine-rich repeat signature 790 803 - -
Mal4g3573 1253 PRINTS Leucine-rich repeat signature 361 374 - -
Mal4g3573 1253 SMART LRR_typ_2 741 765 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 478 502 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 141 165 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 237 261 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 189 213 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 285 308 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 790 813 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 117 140 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 430 454 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 382 406 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 309 333 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 814 837 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 693 717 IPR003591 -
Mal4g3573 1253 SMART LRR_typ_2 93 116 IPR003591 -
Mal4g3573 1253 SUPERFAMILY L domain-like 570 840 - -
Mal4g3573 1253 SMART serkin_6 950 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3573 1253 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1078 1090 IPR008271 GO:0004672|GO:0006468
Mal4g3573 1253 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 6 1249 - -
Mal4g3573 1253 SUPERFAMILY L domain-like 30 327 - -
Mal4g3573 1253 Gene3D Phosphorylase Kinase; domain 1 913 1030 - -
Mal4g3573 1253 Pfam Leucine Rich Repeat 143 165 IPR001611 GO:0005515
Mal4g3573 1253 Pfam Leucine Rich Repeat 95 117 IPR001611 GO:0005515
Mal4g3573 1253 Pfam Protein kinase domain 955 1230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3573 1253 Gene3D Transferase(Phosphotransferase) domain 1 1031 1252 - -
Mal4g3573 1253 Gene3D Ribonuclease Inhibitor 183 280 IPR032675 -
Mal4g3573 1253 ProSiteProfiles Leucine-rich repeat profile. 95 118 IPR001611 GO:0005515
Mal4g3573 1253 Pfam Leucine rich repeat N-terminal domain 30 66 IPR013210 -
Mal4g3573 1253 Gene3D Ribonuclease Inhibitor 27 182 IPR032675 -
Mal4g3573 1253 SUPERFAMILY Protein kinase-like (PK-like) 926 1233 IPR011009 -
Mal4g3573 1253 ProSiteProfiles Protein kinase domain profile. 950 1238 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3573 1253 ProSitePatterns Protein kinases ATP-binding region signature. 956 979 IPR017441 GO:0005524
Mal4g3573 1253 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE GSO1 6 1249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3573 Mal-Chr4 105596018 105600217 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3573 573 831 Receptor kinase-like Gene Family AT1G73080 34.982 2.42e-31 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal4g3573 Pkinase 5.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3573 - - mtr:MTR_2g437730 1845.86