Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3572 ATGGTAGAAACGACACTCCTAGAACGTGAAGTCAATCTTCACCATTCATCTCCACCGCCAAGCACCGGTGTAGATAAATTAGTGAACAATATTGCGCAACATGGAAAAGAGAGTATTGTTGATTATATACCGCACTTGCAAATGGAGTTTGAGTATGAGGTTGTGGCATATGAATTTTATAATGAGTATAGTAGGAAATGTGGTTTCGGTATCCGTCGAGAATATGCAAATAAAAGCAAAAAAGATGGAGTTCTTACTTCAAGAAGATTTGTATGCTTCAAAGAGGGTAAACGAAGTGGTGACAAACGAGACTACTTGACAAAAGAGGCTCGAGCAGAAACTAGAACATGA 351 0.3875 MVETTLLEREVNLHHSSPPPSTGVDKLVNNIAQHGKESIVDYIPHLQMEFEYEVVAYEFYNEYSRKCGFGIRREYANKSKKDGVLTSRRFVCFKEGKRSGDKRDYLTKEARAETRT* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3572 116 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 24 116 - -
Mal4g3572 116 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN 24 116 - -
Mal4g3572 116 Pfam FAR1 DNA-binding domain 58 116 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3572 Mal-Chr4 105592372 105592925 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g3572 FAR1 8.8e-12 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3572 - K17604 mtr:MTR_5g015480 170.629