Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3563 ATGTTGAAGAAATGGTTTCTCTGCCACAATGTTGTTTCAGGTATCATCATTACCACAAGAAGATTCTACAACCCTCTTTTGCACCAACGCTTTTCGTTCCCATTTTCACTCACAAGATTCAGCACCACATCTCAATCTGAATCACAACCATTCGCTGTATCTTATCTCATCAACAATTTTGGTTTCTCACATGAATCAGCTCTCAAAGCTTTCAACCTCAAACAGTTCTCACCTTCTTTCAAAAACCATGGTTTTTCACATTCCAACATACACATCATCATCACAAAAGCACCTTGGTTACTTTCATCACAACCCCACAATGCAATTTTACCAAAGTTTCAATTTTTTCTATCCAAAGGTGCTTCTTCCTCTGATATTGTTTCATTAATAACTGCAAACCCTAGAATTTTACAACATAGCTTGGAGAAACGAATAATACCTTTGTTTGAATTGTTAAGTAAGTTCTTCAAAACCAACAATGATATCATTCTTTGCTTAATTCGACATTCAAAGTCGTTTACTATGAATTCCTATCACCTTATCGTGGCTAATATCAATTTGATGACTGATTTTGGAGTTTCTGATTCTATCATCGCTAATTTTCTTCAAAGAATGCCATCTTTATTTGGTTCAACTAATTTGATTAAGTCATTGGTGGAAGTTAAGGGTTTAGGGTTTGATCCTTCAATGAATACTTTTGGGACTGCTTTGATGGCCAAGAAATTTATGAGTAAAAAACTTTGGGATGAGAAAGTTGATACCTTTAAGAAATGGGGTTGGTCTGATGAAGTTGTTATTCGAGTATTTAGGTGTCATCCTGATATTATGTTGACTTCCATTGAAAAGATTAATTTGGTGATGAATTTTTGGGTCAATCAATTGGATTGGAATTCCTTGGAACTTACCAAAATGCCACATATGTTTTCTTATAGTTTGGAGAAAAGGGTCATTCCAAGGGCCTCAGTTATGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCTAGCTTAGTTACACCATTTTTTTATTCTGAGAATTTGTTCTTGAACAAGTTTGTTTTCAGATTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAAGAAAAAAGGAAACTTGCAAATACAAAGGAGAACATTGGCATGCCATCCACCAAATGTGTAATTTATTGA 1176 0.3427 MLKKWFLCHNVVSGIIITTRRFYNPLLHQRFSFPFSLTRFSTTSQSESQPFAVSYLINNFGFSHESALKAFNLKQFSPSFKNHGFSHSNIHIIITKAPWLLSSQPHNAILPKFQFFLSKGASSSDIVSLITANPRILQHSLEKRIIPLFELLSKFFKTNNDIILCLIRHSKSFTMNSYHLIVANINLMTDFGVSDSIIANFLQRMPSLFGSTNLIKSLVEVKGLGFDPSMNTFGTALMAKKFMSKKLWDEKVDTFKKWGWSDEVVIRVFRCHPDIMLTSIEKINLVMNFWVNQLDWNSLELTKMPHMFSYSLEKRVIPRASVMQFLLMKGLRKKNASLVTPFFYSENLFLNKFVFRFKEESDYLLKLYEEKRKLANTKENIGMPSTKCVIY* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3563 391 Pfam mTERF 244 346 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 Pfam mTERF 80 215 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 SMART mt_12 127 158 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 SMART mt_12 199 227 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 SMART mt_12 266 297 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 SMART mt_12 298 332 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 Gene3D Transcription termination factor 3, mitochondrial 160 366 IPR038538 -
Mal4g3563 391 PANTHER CGI-12 PROTEIN-RELATED 22 376 IPR003690 GO:0003690|GO:0006355
Mal4g3563 391 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 22 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3563 Mal-Chr4 105419134 105420343 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3563 mTERF 9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3563 K15032 - gmx:102667698 309.686