Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3562 ATGTTGAAGTTAAGTAATACATGGTGCTACAGTCTCAAGAATGGATTAACTTCATCACCATCCCCAAAATACCCTTTATCATTTTCTCTGCATTTCTGTACCAACACTTCAGATTCAACCTCATTTCCAGTGTCCTATCTCATTCACAATTTTGGGTTTTCCCCACAATCTGCTTCCAAACTCTGCTCCACTTACAAGCTCGGTTTCAAAACCAACCAAAAACCTGATTCTGTTCTCAACTTCTTTAGAAACCATGGTTTCTCTGATTCCCAATTACGCAATTTGATTGCAAAGGCACCATGGTTACTTTCATGTGACCCCTCCAAAAGGGTTTTGCCCAAGTTTCAATTTTTTCTCTCCAAAGGTGCCTCTAACTCTGATATTGTTAACATTGTCAGTAAGAACTCCACAATCCTGAAAGCAAGCCTGAATAATCAAATTATCCAAACCTATGAATCGGTTTATAGATTCTTGCAATCTGACAAAGACACTTTTGCTTGTTTGATTCACAATCCAGATTTATTTAGACACAGTCGTGCGTTATCTAACATCAGATTGCTTGTTGAGAATGGAGTGGCCGACTCAAACATTGCAAGATTGCTTCGGATTCGGAGTCATATATTCCAGACACAATACATGCTGGAATTGGTGGAGGAATTAAAGGATTTGGGGTTTAATCCCTCAAAAACAACTTTTGGTGTAGCATTGCATGCCAAAACATCTGTAAATGAAACCCTATGGAAAGAAAAAGTTGATGTCTTTAAGAAGTGGGGTTGGTCTGACGAAGATATTGTGGAAGCATTTAGAAGGCAACCTCACTGTATGTTGGTATCCATTGATAAAATTAATTTAGTGATGAGTTTTTGGGTCAATCAGTTGGGTTGGGATGCACTTGCCCTTGCCAAAAGACCATCCGTTTTTTCTTTAAGTTTGGAAAAAAGGATCATTCCAAGGGCCCAGGTATTGCAATTTCTGCTGAAGAAAGGTTTGCGAGAAAAAAATACAAGCTTAACTAGTCCGTTTACATTACCTGATAGGTTGTTTCTTGATAAGTTTATAATACGTTTTGAGAAGGAGTCTTCTTATCTATTAAAGCTGTATGAGGAAAAACTCAATCTTGCATTCACCACAGACAAAACTTGCATGTAA 1149 0.3795 MLKLSNTWCYSLKNGLTSSPSPKYPLSFSLHFCTNTSDSTSFPVSYLIHNFGFSPQSASKLCSTYKLGFKTNQKPDSVLNFFRNHGFSDSQLRNLIAKAPWLLSCDPSKRVLPKFQFFLSKGASNSDIVNIVSKNSTILKASLNNQIIQTYESVYRFLQSDKDTFACLIHNPDLFRHSRALSNIRLLVENGVADSNIARLLRIRSHIFQTQYMLELVEELKDLGFNPSKTTFGVALHAKTSVNETLWKEKVDVFKKWGWSDEDIVEAFRRQPHCMLVSIDKINLVMSFWVNQLGWDALALAKRPSVFSLSLEKRIIPRAQVLQFLLKKGLREKNTSLTSPFTLPDRLFLDKFIIRFEKESSYLLKLYEEKLNLAFTTDKTCM* 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3562 382 Pfam mTERF 243 348 IPR003690 GO:0003690|GO:0006355
Mal4g3562 382 Pfam mTERF 79 226 IPR003690 GO:0003690|GO:0006355
Mal4g3562 382 SMART mt_12 93 124 IPR003690 GO:0003690|GO:0006355
Mal4g3562 382 SMART mt_12 297 331 IPR003690 GO:0003690|GO:0006355
Mal4g3562 382 SMART mt_12 265 296 IPR003690 GO:0003690|GO:0006355
Mal4g3562 382 SMART mt_12 129 160 IPR003690 GO:0003690|GO:0006355
Mal4g3562 382 Gene3D Transcription termination factor 3, mitochondrial 160 359 IPR038538 -
Mal4g3562 382 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 15 375 - -
Mal4g3562 382 PANTHER CGI-12 PROTEIN-RELATED 15 375 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3562 Mal-Chr4 105416019 105417167 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3562 mTERF 1.6e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3562 K15032 - gmx:102663414 394.43