Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3560 ATGAATCAGCTCTCAAAGCTTTCAACCTCAAACAGATTACTTCAATCAAGGCCATCAATATTTGGTTCAAAGGATTTGATTAAGTCATTGGAGGAAGTTAAGGATTTAGGGTTTGATCCTGCAAGGACTACTTTTGGGTCTGCTTTGATAGCCAAAAAATGTTTGAGTAAAAAACTTTGGGATGAGAAAGTTGATGTCTTTAAGAAAAGGGGTTGGTCTGATGAAGCTGTTATTCGAGCATTTCGAATTCAGCCTGATTTGATGCTGGCTTCAATTGATAAGATTAATTTGGTGATGAGTTTTTGGGTTAATCAAATGGGTTGGGATTCCTTAGCACTTACTAAAAGTCCACTTATGTTTGGTTTTAGTTTACATAAAAGGATCATTCCAAGGGCCTCAGTTTTGCAATTTCTTTTGATGAAAGGTTTGCGAAAAAAGAATGCAAGTTTAGTTACACCATTTACTTATTCTGAGAATTTGTTCTTGAACAAGTTTGTTTTCAGCTTTAAGGAGGAGTCTGATTATCTATTAAAGCTATATGAGGAAAAAATGAAACTTGCAAATACAAAGGAGAAGATTGGCATGCCATCTACCAAATGTGTAATTTATTGA 612 0.3464 MNQLSKLSTSNRLLQSRPSIFGSKDLIKSLEEVKDLGFDPARTTFGSALIAKKCLSKKLWDEKVDVFKKRGWSDEAVIRAFRIQPDLMLASIDKINLVMSFWVNQMGWDSLALTKSPLMFGFSLHKRIIPRASVLQFLLMKGLRKKNASLVTPFTYSENLFLNKFVFSFKEESDYLLKLYEEKMKLANTKEKIGMPSTKCVIY* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3560 203 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 10 189 - -
Mal4g3560 203 SMART mt_12 78 109 IPR003690 GO:0003690|GO:0006355
Mal4g3560 203 SMART mt_12 11 39 IPR003690 GO:0003690|GO:0006355
Mal4g3560 203 SMART mt_12 110 144 IPR003690 GO:0003690|GO:0006355
Mal4g3560 203 PANTHER CGI-12 PROTEIN-RELATED 10 189 IPR003690 GO:0003690|GO:0006355
Mal4g3560 203 Pfam mTERF 55 161 IPR003690 GO:0003690|GO:0006355
Mal4g3560 203 Gene3D Transcription termination factor 3, mitochondrial 4 178 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3560 Mal-Chr4 105395367 105396385 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal4g3560 mTERF 4.2e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3560 K15032 - gmx:102661928 215.312