Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3557 ATGGCTTCTTCTTTTTCTCTTTATCAACCAACACCATGCTTCTTCTCAAAAACCCAGTTCAAAGGTTTGCGCCATGGCTATTTGTGGCGACCCACTTACTTATTTGGCTCTTGTGCTGAAAACAAAGTACAACCTGTTAAAGCTTCTGTTGATGCTGCCACATTTCCGTTGCTTCAGCCTCCTCAAGTTGAAGAAACAGCTTCTGAGTTGGAGCCTGTAGATCCAGATTTCTACAAGATAGGATTCGTCCGAAGTATGCGAGCTTATGGAGTTGATTTTAAGGAAGGGCCAAATGGTTTTGGTGTGTATGCTTCTAAAGATGTCGAACCTCTTCGCCGACCAAGGGTTATAATGGAAATTCCTCTTGAATTGATGCTAACCATAAGCAAGAAACTTCCATGGATGTTTTTCCCTGATATAATACCACTTGGCCATCCAATATTTGATATTATCAACTCGACAAATCCAGAGACAGATTGGGATTTACGATTAGCATGCCTTCTCTTGTTTTCATTTGACTGCAAAGACAACTTTTGGCAGTATTACGGCGATTTCTTACCAAGTGCAGATGAAAGTACTAGCTTACTTCTAGCTACAGAGGAGGAACTTTTGGAGCTGCAGGATCTGGATCTTGCTTCTACAATGAGAGTTCAGCAACAACGAGCGTTAGAATTCTGGGAGAAGAACTGGCATAGTGGTGCGCCGCTCAAAGTAAAACGTCTTGCTCGTGATCCTCAAAGGTTCATGTGGGCAGTAGGAATTGCACAGTCACGATGTATCAACATGCAAATGAGAATGTGTGCACTAACTCAACATGCAAATATGCTGATCCCTTATGCCGATATGCTGAACCATTCGTTTGAGCCAAATTGTTTTTTCCATTGGCGTTTTAAGGACAGGATGCTTGAGGTTCTTATAAATGCTGGACAACGGATAAGAAAGGGAGATGAGATGACAGTTGATTACATGAGTGCACAGAAGAACGACATGTTAATGCAAAGATACGGATTTTCATCGCCAGTGAATCCTTGGGATGTGATCAAATTCTCAGGCAATGCACGAATCCATTTGGACTCCTTCTTGTCAGTCTTCAACATATCTGGCCTTCCTGAAGAGTATTATCGTAACGAAGTTCTATCGAGCACTGGAGATACTTTTGTCGATGGAGCGGTCATAGCTGCAGCACGAACCTTGCCAACATGGTCAGATGGAGATGTTCCTCCAATCCCAAGTGAAGAAAGAAAGGCTGCGAAGGCATTACAACAAGAGTGCAAACAAATGCTTGCAGAATTTACTACCACCTCTAAGCAAGACCAGAAATTATTAGATTCATCACCAGAAGCTAGGAGAACTCTTGAAGCTGCAATAAAGTATAGATTGCACAGAAAATTGTTAATGGAAAAAGTTATGCTAGCATTGGAGATCTATCAAGAGCAAATACTATTCTGA 1449 0.4175 MASSFSLYQPTPCFFSKTQFKGLRHGYLWRPTYLFGSCAENKVQPVKASVDAATFPLLQPPQVEETASELEPVDPDFYKIGFVRSMRAYGVDFKEGPNGFGVYASKDVEPLRRPRVIMEIPLELMLTISKKLPWMFFPDIIPLGHPIFDIINSTNPETDWDLRLACLLLFSFDCKDNFWQYYGDFLPSADESTSLLLATEEELLELQDLDLASTMRVQQQRALEFWEKNWHSGAPLKVKRLARDPQRFMWAVGIAQSRCINMQMRMCALTQHANMLIPYADMLNHSFEPNCFFHWRFKDRMLEVLINAGQRIRKGDEMTVDYMSAQKNDMLMQRYGFSSPVNPWDVIKFSGNARIHLDSFLSVFNISGLPEEYYRNEVLSSTGDTFVDGAVIAAARTLPTWSDGDVPPIPSEERKAAKALQQECKQMLAEFTTTSKQDQKLLDSSPEARRTLEAAIKYRLHRKLLMEKVMLALEIYQEQILF* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3557 482 CDD SET_LSMT 90 337 - -
Mal4g3557 482 Gene3D - 353 480 IPR036464 -
Mal4g3557 482 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 14 45 468 - -
Mal4g3557 482 Pfam SET domain 99 322 IPR001214 GO:0005515
Mal4g3557 482 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 45 468 - -
Mal4g3557 482 Gene3D set domain protein methyltransferase, domain 1 82 337 - -
Mal4g3557 482 SUPERFAMILY SET domain 98 338 IPR046341 -
Mal4g3557 482 Pfam Rubisco LSMT substrate-binding 411 463 IPR015353 -
Mal4g3557 482 ProSiteProfiles SET domain profile. 78 323 IPR001214 GO:0005515
Mal4g3557 482 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 334 471 IPR036464 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal4g3557 SET 9.5e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3557 - - cam:101505820 881.708