Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3532 ATGGCTGAAATTCACACACAAACTCCAACTCCAACAATTAGTCCCACGATAAGCAAACCATGTAATCCTCCACAACAACATGGTCTCAATTCAATGGTTCTTGTTGCAGCTATAGTATGTGCTTTACTTTGTGCTCTTGGCCTCAACACAATGTTACAATGTGTGTTCCAATGTGCCAACCGTGTCATTACCGAACCGTTACAATGGATTGCTTCTCGAAGGCGCAATTCCGGACTCAAGGAGAAAGAAATGGTTGCTTTGCCAACATCAATTTATAATACTCATTCAACTGAATCACCTCCTACATCTTTGGATTCTAATTGTGCCATTTGCTTAGCTGAATTTTGTGATGGAGATAACATGAAGTTGCTACCAAAGTGTAATCATCGTTTTCATGTTGTTTGCATTGATAAGTGGTTGCTTTCTCATTCCTTTTGTCCTACTTGTAGGAAAATGATCAAGTCCAATGATTCAGTACACTGCTTAAGCATTGTCATATCATAG 504 0.3909 MAEIHTQTPTPTISPTISKPCNPPQQHGLNSMVLVAAIVCALLCALGLNTMLQCVFQCANRVITEPLQWIASRRRNSGLKEKEMVALPTSIYNTHSTESPPTSLDSNCAICLAEFCDGDNMKLLPKCNHRFHVVCIDKWLLSHSFCPTCRKMIKSNDSVHCLSIVIS* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3532 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 67 156 IPR013083 -
Mal4g3532 167 Pfam Ring finger domain 107 150 IPR001841 -
Mal4g3532 167 ProSiteProfiles Zinc finger RING-type profile. 108 150 IPR001841 -
Mal4g3532 167 PANTHER OS06G0666500 PROTEIN 18 161 - -
Mal4g3532 167 SMART ring_2 108 149 IPR001841 -
Mal4g3532 167 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 18 161 - -
Mal4g3532 167 SUPERFAMILY RING/U-box 107 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3532 Mal-Chr4 104409215 104409718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3532 4 153 C3H Transcription Factor Family AT1G20823 39.752 4.18e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3532 - - gmx:100803003 236.498