Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3528 ATGGCCCCCGGTGTGAGAGACTTACAACTCACTACTCTATCCGCCGGCCGGAAAATTGCCGGCACCGCCGACTCCGATGACTTGGAGGACGTACGACTACTAGACTCCGACGACGGAGTTGACGATGATATGAGAAGAATTCAGGTGAGAGTCTCCGGTATGACATGCGCCGCTTGCTCTAATTCTGTAGAATCAGCTCTGAAAGCTGTTGACGGTGTTTTCAGTGCTTCTGTCGCTTTACTACAGAACAAAGCTGACGTAGTCTTCAACCCTGCTCTCATCAAGGATGAGGACATTAAAAATGCAATTGAAGATGCAGGCTTTGAAGCCGACATATTACCTGAATCTAGTGGACTTGGAAAGATTCCACACGAAACCCTGGTTGGACAATTCACAATTGGAGGTATGACATGTGCAGCTTGTGTAAATTCTGTTGAAGGTATTTTGAGAAATCTTCCAGGGGTTAAAAGGGCAGTGGTAGCTCTGGCTACTTCGTTAGGCGAAGTTGAATATGATCCAAGTGTAATTAGTAAAGATGATATAGTCAATGCAATTGAAGATTCTGGCTTCGAAGCCTCGTTTGTACAGAGCAACGAGCAGGATAAAATTATTTTTGGAGTTGTTGGTGTGTACAATTTAACAGACACACAAATTTTAGAAGGCATGCTTAGTAACATGAAAGGAGTAAGACAGTTTCGTTTTGAACAGATATCGGGTGAATTAGATGTTATGTTCGATCCTCAAGTTCTCAGTCCAAGGTCCTTAGTTGATTGGGTCCACGGGGAAAGCAATGGAAAGTTTGAATTACATGTTAGAAGCCCTTATACAAGGATGGCTTCTAAAGATGTTGAAGAGACCTCAACTATATTTCGGCTCTTTATCTCCAGCCTGTGTCTTAGTGTTCCTCTCTTCTTCATGAAGGTTGTTTGTCCTCATATTCCGTTTATGTATTCCTTGTTACTTTGGCGTTGTGGGCCTTTCCTCATGGGTGATTGGTTGAAATGGGCATTGGTGAGTGTCATCCAATTTGGAATTGGGAAGCGCTTTTATGTTGCAGCTGGCAGGGCTCTTAGAAATGGTTCAACAAACATGGATGTCCTGATTGCTGTGGGAACTACCGCCTCTTACGTTTATTCTGTTTGTGCTCTTCTATATGGTGCTCTTACTGGATTTTGGTCCCCAACTTACTTTGAAACAAGTGCTATGCTTATAACATTTGTATTGTTGGGGAAGTATTTGGAAGTCCTTGCCAAGGGAAAGACATCTGATGCCATCAAGAAATTAGTAGAACTTGCTCCTGCAACAGCTTTATTAATTATTAATGATAAAGATGGTAAATCTATTGAAGAAAGGGAAATTGATTCCTTGCTTCTTCAACCTGGTGACATATTGAAAGTTCTTCCTGGTACGAAGATTCCTGCTGATGGTATTGTTACTTGGGGATCAAGTTATGTAAATGAGAGCATGGTAACCGGTGAATCTGTACCTGTTTTGAAGGAGGTGAATGCTTCTGTTATTGGGGGTACAATAAATTTGCATGGCGTCCTTCACATAAAAGCTACTAAAGTAGGATCTGATACAGTTTTGAGTCAGATAATAAGTTTGGTTGAAACAGCACAGATGTCCAAAGCTCCCATTCAGAAGTTTGCTGATTATGTAGCAAGCATATTTGTTCCTACAGTTGTTTCTTTGGCACTATTGACATTTTTGGGCTGGTATATTGCTGGTTCTATTGGAGCTTACCCAGATGAATGGCTTCCAGAAAATGGAAATCACTTTGTGTTTGCCCTAATGTTCTCAATATCCGTAGTAGTGATTGCATGTCCCTGTGCACTTGGCTTAGCAACACCGACAGCTGTCATGGTCGCAACAGGGGTTGGGGCTAACAATGGAGTATTAATTAAAGGAGGAGATGCCTTGGAAAGGGCTCAGATGGTGAAGTATGTGATATTTGATAAAACAGGCACTCTAACTCAGGGAAAAGCCAGTGTTACTACTGCCAAGGTATTCACTGGAATGCAACGTGGGGAATTTCTTACATTGGTGGCTTCTGCTGAGGCTAGCAGTGAACACCCACTGGCAAAAGCAGTATTAGCATATGCACGTCACTTTCATTTCTTTGACGATTCTTCAGCTACTACACAGAATGATGTGAAGTCTGGGTGGCTTTTTGATGTCTCGGACTTCTCTGCTCTCCCAGGAAGAGGTGTTCAATGCTCTATAGATGGGAGACGTATTTTGGTTGGCAACAGGAAGTTGATGATGGAAAGTGGTATAGATATTTCAACAGAAGTGGAAAATTTTGTCGTTGAGCTGGAACAAAATGCACAGACAGGGATACTAGTATCATATGATGATATATTAATCGGAGTTTTGGGGGTCGCAGACCCACTAAAGAGAGAAGCTTCTGTGGTTATAGAGGGCCTCCAGAAAATGGGTGTCATACCTGTTATGGTTACAGGCGATAACTGGAGAACAGCTAATGCCGTTGCCAAGGAGGTTGGAATCCAAGATGTAAGGGCAGAGGTGATGCCTGCGGGAAAAGCCGAAATTGTTCGTTCATTCCAAAAGGACGGAAGCATAGTTGCAATGGTGGGTGATGGTATCAACGATTCTCCAGCCTTAGCTGCTGCTGATGTTGGCATGGCGATTGGGGCAGGAACTGATGTTGCAATAGAAGCTGCTAACTTCGTCTTGATGAGAAATAACTTGGAAGATGTGATCACAGCCATCCATCTTTCCCGGAAGACGTTCTCTCGTATAAGATTGAATTACGTATTCGCGATGGCTTACAATGTTGTTGCTATACCAGTTGCAGCTGGGGTTTTATATCCTTCACTGGGTATCAAACTGCCACCATGGGTTTCTGGTGCATGCATGGCTCTGTCTTCTGTAAGTGTTGTATGCTCTTCTTTACTTCTTAAAAGATATAGAAGACCCAGACTTACCACAGTACTTGAAATAATTGTAGAATAA 2976 0.4267 MAPGVRDLQLTTLSAGRKIAGTADSDDLEDVRLLDSDDGVDDDMRRIQVRVSGMTCAACSNSVESALKAVDGVFSASVALLQNKADVVFNPALIKDEDIKNAIEDAGFEADILPESSGLGKIPHETLVGQFTIGGMTCAACVNSVEGILRNLPGVKRAVVALATSLGEVEYDPSVISKDDIVNAIEDSGFEASFVQSNEQDKIIFGVVGVYNLTDTQILEGMLSNMKGVRQFRFEQISGELDVMFDPQVLSPRSLVDWVHGESNGKFELHVRSPYTRMASKDVEETSTIFRLFISSLCLSVPLFFMKVVCPHIPFMYSLLLWRCGPFLMGDWLKWALVSVIQFGIGKRFYVAAGRALRNGSTNMDVLIAVGTTASYVYSVCALLYGALTGFWSPTYFETSAMLITFVLLGKYLEVLAKGKTSDAIKKLVELAPATALLIINDKDGKSIEEREIDSLLLQPGDILKVLPGTKIPADGIVTWGSSYVNESMVTGESVPVLKEVNASVIGGTINLHGVLHIKATKVGSDTVLSQIISLVETAQMSKAPIQKFADYVASIFVPTVVSLALLTFLGWYIAGSIGAYPDEWLPENGNHFVFALMFSISVVVIACPCALGLATPTAVMVATGVGANNGVLIKGGDALERAQMVKYVIFDKTGTLTQGKASVTTAKVFTGMQRGEFLTLVASAEASSEHPLAKAVLAYARHFHFFDDSSATTQNDVKSGWLFDVSDFSALPGRGVQCSIDGRRILVGNRKLMMESGIDISTEVENFVVELEQNAQTGILVSYDDILIGVLGVADPLKREASVVIEGLQKMGVIPVMVTGDNWRTANAVAKEVGIQDVRAEVMPAGKAEIVRSFQKDGSIVAMVGDGINDSPALAAADVGMAIGAGTDVAIEAANFVLMRNNLEDVITAIHLSRKTFSRIRLNYVFAMAYNVVAIPVAAGVLYPSLGIKLPPWVSGACMALSSVSVVCSSLLLKRYRRPRLTTVLEIIVE* 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3528 991 PANTHER HEAVY METAL P-TYPE ATPASE 19 984 - -
Mal4g3528 991 SFLD p-type atpase 632 917 IPR044492 -
Mal4g3528 991 Gene3D - 44 115 - -
Mal4g3528 991 PRINTS P-type cation-transporting ATPase superfamily signature 812 822 - -
Mal4g3528 991 PRINTS P-type cation-transporting ATPase superfamily signature 650 664 - -
Mal4g3528 991 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Mal4g3528 991 PRINTS P-type cation-transporting ATPase superfamily signature 790 801 - -
Mal4g3528 991 PRINTS P-type cation-transporting ATPase superfamily signature 888 900 - -
Mal4g3528 991 PRINTS P-type cation-transporting ATPase superfamily signature 486 500 - -
Mal4g3528 991 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 364 974 IPR027256 GO:0006812|GO:0016021|GO:0019829
Mal4g3528 991 Pfam Heavy-metal-associated domain 131 191 IPR006121 GO:0046872
Mal4g3528 991 Pfam Heavy-metal-associated domain 49 109 IPR006121 GO:0046872
Mal4g3528 991 SUPERFAMILY HMA, heavy metal-associated domain 41 114 IPR036163 GO:0046872
Mal4g3528 991 PRINTS Copper-transporting ATPase 1 signature 72 95 - -
Mal4g3528 991 PRINTS Copper-transporting ATPase 1 signature 101 121 - -
Mal4g3528 991 PRINTS Copper-transporting ATPase 1 signature 46 71 - -
Mal4g3528 991 ProSiteProfiles Heavy-metal-associated domain profile. 46 112 IPR006121 GO:0046872
Mal4g3528 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 736 945 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3528 991 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 677 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3528 991 Gene3D - 418 540 - -
Mal4g3528 991 ProSiteProfiles Heavy-metal-associated domain profile. 128 194 IPR006121 GO:0046872
Mal4g3528 991 SUPERFAMILY Calcium ATPase, transduction domain A 450 536 IPR008250 -
Mal4g3528 991 Gene3D - 617 922 IPR023214 -
Mal4g3528 991 Pfam E1-E2 ATPase 431 629 - -
Mal4g3528 991 CDD HMA 130 193 IPR006121 GO:0046872
Mal4g3528 991 Gene3D - 129 194 - -
Mal4g3528 991 Gene3D - 745 796 IPR023299 GO:0000166
Mal4g3528 991 Gene3D - 657 744 IPR023299 GO:0000166
Mal4g3528 991 CDD HMA 48 110 IPR006121 GO:0046872
Mal4g3528 991 SUPERFAMILY HAD-like 649 971 IPR036412 -
Mal4g3528 991 SFLD Haloacid Dehalogenase 632 917 - -
Mal4g3528 991 Pfam haloacid dehalogenase-like hydrolase 646 879 - -
Mal4g3528 991 CDD P-type_ATPase_Cu-like 291 961 - -
Mal4g3528 991 ProSitePatterns E1-E2 ATPases phosphorylation site. 652 658 IPR018303 -
Mal4g3528 991 SUPERFAMILY HMA, heavy metal-associated domain 126 199 IPR036163 GO:0046872
Mal4g3528 991 ProSitePatterns Heavy-metal-associated domain. 51 81 IPR017969 GO:0046872
Mal4g3528 991 PANTHER ATP7, ISOFORM B 19 984 - -
Mal4g3528 991 TIGRFAM TIGR00003: copper ion binding protein 130 192 IPR006122 GO:0005507
Mal4g3528 991 TIGRFAM TIGR00003: copper ion binding protein 47 110 IPR006122 GO:0005507
Mal4g3528 991 ProSitePatterns Heavy-metal-associated domain. 133 162 IPR017969 GO:0046872
Mal4g3528 991 SUPERFAMILY Calcium ATPase, transmembrane domain M 382 940 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3528 Mal-Chr4 104351186 104357289 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3528 1 991 Primary Pumps ATPases AT5G44790 73.168 0.0 1488
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3528 K17686 - gmx:100804960 1691.78