Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3517 ATGGAGATGAGCTGTCCATCAAATGTTAACGGCAATGTTTCCGTGTGCTCTACCAGCACAGTTAATATTTCACACTCACACCAGAGTTTCTGTGGCTTTGTTCAACAGCCTGCTTTCGTGAGTGGGTGGATGTATGTAAATGAACATGGACACATGTGTGGTCCCTATATTAAGGAGCAGTTATATGAGGGCCTAACTACAGGTTTCTTGCCATTTGAGCTTCCTGTGTATCCTGTGATCAATGGCACAATAATGAACTCTGTACCGTTGAATTATTTTAAACAGTATCCTGACCATGTTTCCACCGGGTTTGCATATCTGAGTATGGATTTCTCAAATGCAAGGATGTCTACAAATTGCTCCTCCTCTTCTCAGGATATGATGGTATATGGGCAAGATAGGTCTGTTGAGTTTGCCGCTCTTAAGGCTGTCAACCCTAATTCAAAGTCTGTTTCACAATCACATGTCAATGACTGCGCCAAGGAATCCAATCACTTGAATTTATGCTCAGAGGCATTCAGCAGGATAATTTCTTCTCAGATGTTGGGAGGAGAATGCTGTTGGCTTTATGAGGATAAAAAGGGTATGAAACATGGGCCACATTCCATTTCGGAGTTGATTTCCTGGCACCACCATGGATATCTTGAAGATTCAACAGTGATCTCTCATTTTGATAATAAGTATGGAAGCTTTGTGTTGCTGTCTGCTGTAAATGCAATGAAAGGAGATGATACATCTGGAACCATCTGTGAACCAGATTCCAAAAGCAATGGAGTCGGTGATGTGATGAACATAATTTGTGAAATATCTGAAGACATTTCTTCCCAATTGCACATGGGTGTAATGAAAGCTTCCCGTAGAGTTGTGTTAGCTGGGATTATTGGCGATATCATTGCAGAATTTGTTACTGAAAAGAAATGCAAGAAGCAAAAGCTTGAGTCTGCTGATCAAACTTCTGAAACTTGCATATTGAACAATAAAATGATGAATAAAGGTACTTCCATTCCAAGTGAGCCTGCACCCTCCCATATTTTGAATGGTCAAGTTTGTCATGAAATTTCCAGACCGTCTTCAACAAATGTTAAGTCAGTTGGAAGCATTGAAAATTTTTGGTGGTCATATGCTGCTGTTCGTAAAGTACTTTTTGATCATTCCTTGCAAGTCATGTGGAATGCAGTGTTTTTTGACACTGTGACAGAGTTCTTATTTTCCTGGAGGAAGAGGAAATATTGGTCTCATCCTAAGCCTCAATCATCTTTGGTTCTCAGGCCAGGTTCCTCTGTATGCAATGCTGATGCTGATATCCAGTCTGGAGTGATGGTGACTGAAAGATATTGTCTTCCTGAGTTAATTTTATCTCCTAATAACCTCAAAAGTGGAAACACAGCAGAAGGTCAAAGAGTTTCATGCAGTTATCATAAGTCTAAAGATTTGACGTACATTCTTGAAAGTGTGGAGAACGAGCTTCACTTCTCTGCGCAGGTGTCTTTAGCTGATTATGTTCGAAGTGTTGTTGAAAAGGAAGTTAGCCAATTAATTCCTTCCCTAGAGAAAGACACATTTAGTGAGGTTGATGTTAGTGACTGCCGTATCTCAGAGATGGTTACCGATAAAACATCTATTAAAGAAATTCTAAGTGACAAGTCTATCGATCCTGTGAAAAATGGAGACTCAATTTGCATGCCTTCATCTGGAAACCATATGTCTAATGTATTATCAACAGCATTTCATGAATTGTGTGGACATTTAAATGATGTGGTTGATGAAGAGGAGATTGGTGACCTACCACCTGGATTCGAAAAGAACTCTCAAACAATATTCCCACACTACAATTCAAAATTCCGACCTTCAAGAATAGTTGAATGTAATCCTAAGATTACGGAATATGTTGCAGCTGCACTATGCAGACAGAAGCTGCATGATGAAGTTCTAGAAGAGTGGAAGTTGTCAGTTCTTGATTCTACATTTAAACAAGCTTTTAAGTCATCATGTACCATAAAGAAGAATTCTCAGTCTCGTGGTCAAGTGAAGGGGAAGTCATTGAGTGTAAGCAAAGAGCATTCAAATGATACTACTTCTGGACTAGGAAAAGTCAAGGACAGCACAAAAAGTTCTGGAGTTCCTCTGCCGATTGGAAAGTATACATATCACCGCAAGAAGCTGTCACGGAAAGAGCCTTGCTCCTCTCAGCCTGTTGTAGAAGATTATTCAGGGCCAGGGAAGCAGCCTCTGGCTAAGTTAAGGAAATATGTTTCTGGAGATGTGAATGAGAATGCAGAAGTTAAAGTAACTGCTATTAAACGTGGAAATGCTAAGATGATTAAAGTGAAGAAGAATACATCTTCTAAGATCAGGTCTTCTGTCAATGTTGATAATAGCTTACCCAGTGATCAATTATCCTTGAAGAATAAAACTAGCCAGAAAGTATTTAAGTCTGCGCGTACAGTTCAAAACAATGTTACAGATGTTCTGAAGTCTAATGAAAAGAGGCTATTGGCGTCAGCTGACAATAGTGTTTGTATGAAGGTTGTTAAAAGAAATAACACTGATGGCACCATTCTCAGGAAGACTGCCGGTCATATCTCCAGAGAGAAACTAAATGACCGTGTTACGGATGCTGTGAAGTCTAATGAAAAGAGGCTATCAGCGTCAGCTGATAATAGTCTTGGTACGAAGGTGGTTAAAAGAAATAACTCTGATGGAACCATTCACAGGAAGACCACCGGTCATATCTCTAGAGAGAAACTAAATGAAACAAATAAAGAATCAAAATCAAAAAGGAAGCATCAAACAGATGGTGTTACATCCTCACATCCTGCTAAGGTTTTGAAAATTTCAAATAAGGGTGCAAGTCTGGGAGCTAGCAAACAAGTAACTGAGACACGGAGGAATTCTGCTAAATCGAAGTCATTGGATTTATGTCCTAGATCTAATGGATGTGCTAGGACTTCTATTAATGGCTGGGAATGGCATAAATGGTCTCAAAGTGCTAGTCCTGCAAGTAGAGCACGTGTCAGGGGTCTTCCGCGTTTACATAGCAAGTGCATAGGTTATGAAAATAATTCATCCCAGTTGTCAAATGGTAAGGGTCTTTCTGCAAGAACAAATAGGGTGAAGTTGCGTAACCTTCTTGCTGCAGCTGAGGGTGCGGATCTTCTGAAAGTGCCTCAATTGAAGGCACGAAAAAAGCGATTACGTTTTCAAAGGAGCAAAATACACGACTGGGGTCTTGTTGCCTTGGAGCCAATAGAAGCAGAGGACTTTGTGATTGAATATATTGGAGAATTAATTCGTCCTCGGATATCTGATATACGCGAGCTTCAATATGAGAAGATGGGAATTGGAAGCAGTTACCTTTTCAGACTTGATGATGGTTATGTGGTTGATGCTACAAAGAGAGGTGGAATTGCAAGATTTATTAACCATTCTTGTGAGCCCAACTGTTACACAAAGGTTATATCTGTTGAGGGTCAAAAGAAGATTTTTATATATGCAAAACGGCATATAAATTCTGGTGAAGAAATTACATACAATTATAAGTTTCCCCTGGAGGAGAAAAAGATTCCCTGCAACTGTGGTTCCAAAAAGTGTCGCGGATCAATGAATTAG 3609 0.3976 MEMSCPSNVNGNVSVCSTSTVNISHSHQSFCGFVQQPAFVSGWMYVNEHGHMCGPYIKEQLYEGLTTGFLPFELPVYPVINGTIMNSVPLNYFKQYPDHVSTGFAYLSMDFSNARMSTNCSSSSQDMMVYGQDRSVEFAALKAVNPNSKSVSQSHVNDCAKESNHLNLCSEAFSRIISSQMLGGECCWLYEDKKGMKHGPHSISELISWHHHGYLEDSTVISHFDNKYGSFVLLSAVNAMKGDDTSGTICEPDSKSNGVGDVMNIICEISEDISSQLHMGVMKASRRVVLAGIIGDIIAEFVTEKKCKKQKLESADQTSETCILNNKMMNKGTSIPSEPAPSHILNGQVCHEISRPSSTNVKSVGSIENFWWSYAAVRKVLFDHSLQVMWNAVFFDTVTEFLFSWRKRKYWSHPKPQSSLVLRPGSSVCNADADIQSGVMVTERYCLPELILSPNNLKSGNTAEGQRVSCSYHKSKDLTYILESVENELHFSAQVSLADYVRSVVEKEVSQLIPSLEKDTFSEVDVSDCRISEMVTDKTSIKEILSDKSIDPVKNGDSICMPSSGNHMSNVLSTAFHELCGHLNDVVDEEEIGDLPPGFEKNSQTIFPHYNSKFRPSRIVECNPKITEYVAAALCRQKLHDEVLEEWKLSVLDSTFKQAFKSSCTIKKNSQSRGQVKGKSLSVSKEHSNDTTSGLGKVKDSTKSSGVPLPIGKYTYHRKKLSRKEPCSSQPVVEDYSGPGKQPLAKLRKYVSGDVNENAEVKVTAIKRGNAKMIKVKKNTSSKIRSSVNVDNSLPSDQLSLKNKTSQKVFKSARTVQNNVTDVLKSNEKRLLASADNSVCMKVVKRNNTDGTILRKTAGHISREKLNDRVTDAVKSNEKRLSASADNSLGTKVVKRNNSDGTIHRKTTGHISREKLNETNKESKSKRKHQTDGVTSSHPAKVLKISNKGASLGASKQVTETRRNSAKSKSLDLCPRSNGCARTSINGWEWHKWSQSASPASRARVRGLPRLHSKCIGYENNSSQLSNGKGLSARTNRVKLRNLLAAAEGADLLKVPQLKARKKRLRFQRSKIHDWGLVALEPIEAEDFVIEYIGELIRPRISDIRELQYEKMGIGSSYLFRLDDGYVVDATKRGGIARFINHSCEPNCYTKVISVEGQKKIFIYAKRHINSGEEITYNYKFPLEEKKIPCNCGSKKCRGSMN* 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3517 1202 Gene3D SET domain 895 1202 IPR046341 -
Mal4g3517 1202 SUPERFAMILY SET domain 1059 1199 IPR046341 -
Mal4g3517 1202 MobiDBLite consensus disorder prediction 875 972 - -
Mal4g3517 1202 ProSiteProfiles GYF domain profile. 185 235 IPR003169 GO:0005515
Mal4g3517 1202 Gene3D - 177 252 IPR035445 -
Mal4g3517 1202 SUPERFAMILY GYF domain 182 238 IPR035445 -
Mal4g3517 1202 MobiDBLite consensus disorder prediction 671 743 - -
Mal4g3517 1202 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1202 IPR044570 GO:0042800|GO:0051568
Mal4g3517 1202 SMART PostSET_3 1186 1202 IPR003616 -
Mal4g3517 1202 MobiDBLite consensus disorder prediction 877 897 - -
Mal4g3517 1202 ProSiteProfiles Post-SET domain profile. 1186 1202 IPR003616 -
Mal4g3517 1202 CDD SET_SETD1 1051 1198 - -
Mal4g3517 1202 Pfam SET domain 1075 1179 IPR001214 GO:0005515
Mal4g3517 1202 ProSiteProfiles SET domain profile. 1063 1180 IPR001214 GO:0005515
Mal4g3517 1202 SMART set_7 1063 1186 IPR001214 GO:0005515
Mal4g3517 1202 MobiDBLite consensus disorder prediction 898 934 - -
Mal4g3517 1202 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETD1 1 1202 - -
Mal4g3517 1202 MobiDBLite consensus disorder prediction 671 700 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3517 Mal-Chr4 104101692 104108823 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3517 1062 1202 C2H2 Transcription Factor Family AT2G23740 35.583 2.19e-17 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal4g3517 SET 9.1e-21 No_clan