Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3480 ATGATTGAGAATGTAAGGAGAAGCAACTTTGAAGTGTTGGGAATGTGTTGTGCTACAGAAGCAACACTGGTTGAAAGGATTTTGAAGCCTCTTCATGGAGTCAAAGCTGTCTCGGTGATTGTTCCTTCTCGAACAGTTACTGTAATCCATGATGTTCTCCTTATTTCTGAGTCACAAATAGCTGATGCACTGAATACTGCAAGGCTTGAAGCTAGTTTTAGACCACAAGGAGAGACCAACAATGAAAAGAAATGGCCAGACATACTTACAATGGCATGTGGCTTGTTACTTGCACTTTCATTTTTGAAGTATATATATCCTCCTTTGGGATGGTTGGCTCTTGGTTCTGTTGCCATTGGATTCCCTAAAGTTCTATTTAGGGCTATAGCTTCCATTAGAGCTCTTACTCTTAATATCAACATTTTGGTTTTATTGGCAGTATGTGGTACTGCTGCTTTACAAGATTTTACAGATGGTGGAGTCATCATCTTTCTGTTCTCTATTGCTCAGTGGCTTGAGACAAGAGCAACTCACAAGGCAATGGTTGCAATGTCCTCTTTAACAAACATGGCTCCTCAAATGGCTATTATTGCTGTTACCGGAGAACGTGTTGATGTCAATGATGTTATGATCAACACCGTCCTTGCTGTAAAGGCTGGTGATGCTATTCCTCTTGACGGAATTGTTTTGGACGGAAAGTGTGAAGTTGATGAAAAAATGTTAACGGGCGAATCATTCCCTATCACCAAAGAATCAGATTCACTTGTCTGGGCTGGAACTATTAATATGAATGGATACATAAGTGTAAGAACAACAGTGTTCGCAAAAGACACAATGGTGGCAAGAATGTCAAGACTTGTAGAAGAAGCTTCTAGCAGAAAATCACATGCACAAAGATTCATAGATAATTTTGCAAAGTACTATATTCCAGTGGTTGTGTTGATTTCAGCTAGTATTGCAGTGGTTCCAGCTGCATTAAGTGTTCCTGATATGGAGCCTTGGTTTCATCTAGCACTTGTGGTTTTATTAAGTGGATGCCCTTGTGCTCTTATTCTCTCTACACCAGTTGCAATCTTTTGTGCTCTCACAAAAGCTGCAATAAGTGGATTACTATTGAAAGGTGGAGATTATCTTGAAACACTTTCAAGAATTAAGACAGTGGCTTTTGATAAAACAGGCACCATAACAAGAGGAGAGTTCATTGTAACTGATTTTAGTGTTGCAGATGACATTAACAATGAAACCTTATTGTATTGGGTTTCAAGTATTGAGAGTAAATCAAGTCATCCAGTGGCAGGTGCACTAGTGGAATATGCAATGTTGCACTCTATCAAACCAGTTCCAGAAAATGTAGAGAATTTTCAAAATTTTCCAGGGGAAGGAATTTCTGGTACAATTGATGGTAGGGATATCTATATAGGAAACAAGAGAGTTGGTGTAAGAGCTAGCTGTAAAAGAGATGATTGCAAAGTGAAATTTCAGAGCCATGAGATTTCAACGAAGAATCAAAACTGTGGAGAAACTCTAGTTGGAGTGTTGAGCTTAGTTGATGCTTGTAGATCAGGTGCTTTAGAGGCAATGGAAGAGCTAAAGTCATTAGGTGTGAGATCAGTCATGCTGACAGGAGATAGCTCTCAGGTTGCTATGTATGTTCAGAGTCAGCTAAACAATGCTATAGACATAGTTCATGCAGAGCTTCTACCTCATGAAAAGGCAAAACTTATTGAGAATTTCAAGAAAGAAGGGCCAATAGCCATGATAGGAGATGGCATCAATGATGCTCCTGCATTAGCAACAGCAGATATAGGCATATCAATGGGAATATCTGGTTCAGCTCTTGCAAATGAGACAAGCAACGCGATTCTTATGTCGAATGATATCCGAAAAGTACCTGAAGCGATTCGTTTAGCAAGAAAAACTACTAGAAAGCTCATTGAGAATGTTGTTATTTCAGTTGGATTCAAATGTGCCATACTTGCATTGGCAATTGCTGGTTATCCATTAGTTTGGCTTGCTGTGTTGACTGATGTTGGAACATGCTTACTTGTTATTCTCAATAGCATGTTGATTTTGCAAGAGAATCACAAATATGAAGAAAGACAATCAACAAAGGGTAAATATGGTAATTTTTTGGTAGATAAGACCAAACCATTACTTAACAAGCAAAGTAATATTGATGAGGAAAAAGGGCTTATTAGTGGTGAAGAGTGTAGTAAAGAGTGTTGTAAAAATGTGACTCATCATGTGGCAACTACAAATGCAAGCAAAGATGAATCTTGTGGAGTTTCTAAGTTGAGCTTACTCAAGGGAAATGATTATGAAAAGTTTATGTTTGTTGAAGTTCATGTTGTGAATCCTTGCAATGTTTGA 2370 0.384 MIENVRRSNFEVLGMCCATEATLVERILKPLHGVKAVSVIVPSRTVTVIHDVLLISESQIADALNTARLEASFRPQGETNNEKKWPDILTMACGLLLALSFLKYIYPPLGWLALGSVAIGFPKVLFRAIASIRALTLNINILVLLAVCGTAALQDFTDGGVIIFLFSIAQWLETRATHKAMVAMSSLTNMAPQMAIIAVTGERVDVNDVMINTVLAVKAGDAIPLDGIVLDGKCEVDEKMLTGESFPITKESDSLVWAGTINMNGYISVRTTVFAKDTMVARMSRLVEEASSRKSHAQRFIDNFAKYYIPVVVLISASIAVVPAALSVPDMEPWFHLALVVLLSGCPCALILSTPVAIFCALTKAAISGLLLKGGDYLETLSRIKTVAFDKTGTITRGEFIVTDFSVADDINNETLLYWVSSIESKSSHPVAGALVEYAMLHSIKPVPENVENFQNFPGEGISGTIDGRDIYIGNKRVGVRASCKRDDCKVKFQSHEISTKNQNCGETLVGVLSLVDACRSGALEAMEELKSLGVRSVMLTGDSSQVAMYVQSQLNNAIDIVHAELLPHEKAKLIENFKKEGPIAMIGDGINDAPALATADIGISMGISGSALANETSNAILMSNDIRKVPEAIRLARKTTRKLIENVVISVGFKCAILALAIAGYPLVWLAVLTDVGTCLLVILNSMLILQENHKYEERQSTKGKYGNFLVDKTKPLLNKQSNIDEEKGLISGEECSKECCKNVTHHVATTNASKDESCGVSKLSLLKGNDYEKFMFVEVHVVNPCNV* 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3480 789 ProSitePatterns E1-E2 ATPases phosphorylation site. 390 396 IPR018303 -
Mal4g3480 789 Gene3D - 399 519 IPR023299 GO:0000166
Mal4g3480 789 Pfam E1-E2 ATPase 201 366 - -
Mal4g3480 789 SUPERFAMILY HAD-like 386 688 IPR036412 -
Mal4g3480 789 SUPERFAMILY Calcium ATPase, transduction domain A 203 287 IPR008250 -
Mal4g3480 789 PRINTS P-type cation-transporting ATPase superfamily signature 237 251 - -
Mal4g3480 789 PRINTS P-type cation-transporting ATPase superfamily signature 611 623 - -
Mal4g3480 789 PRINTS P-type cation-transporting ATPase superfamily signature 388 402 - -
Mal4g3480 789 PRINTS P-type cation-transporting ATPase superfamily signature 587 606 - -
Mal4g3480 789 PRINTS P-type cation-transporting ATPase superfamily signature 511 522 - -
Mal4g3480 789 PRINTS P-type cation-transporting ATPase superfamily signature 533 543 - -
Mal4g3480 789 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 5 752 - -
Mal4g3480 789 CDD P-type_ATPase_HM 94 689 - -
Mal4g3480 789 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 161 667 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3480 789 SFLD p-type atpase 371 640 IPR044492 -
Mal4g3480 789 Gene3D - 379 638 IPR023214 -
Mal4g3480 789 SUPERFAMILY Calcium ATPase, transmembrane domain M 139 473 IPR023298 -
Mal4g3480 789 Pfam haloacid dehalogenase-like hydrolase 384 601 - -
Mal4g3480 789 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 5 752 - -
Mal4g3480 789 Gene3D - 2 74 - -
Mal4g3480 789 ProSitePatterns Hypothetical cof family signature 2. 587 609 - -
Mal4g3480 789 Gene3D - 177 291 - -
Mal4g3480 789 ProSiteProfiles Heavy-metal-associated domain profile. 7 73 IPR006121 GO:0046872
Mal4g3480 789 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 139 691 - -
Mal4g3480 789 SFLD C1.7: P-type atpase like 371 640 - -
Mal4g3480 789 SUPERFAMILY HMA, heavy metal-associated domain 3 77 IPR036163 GO:0046872
Mal4g3480 789 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 139 689 IPR027256 GO:0006812|GO:0016021|GO:0019829
Mal4g3480 789 CDD HMA 10 72 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3480 Mal-Chr4 102529091 102534157 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3480 3 759 Primary Pumps ATPases AT4G30110 55.844 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3480 K01534 - gmx:100815324 1234.55