Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3478 ATGTCAACAGCAGTTCTCATCGGCGCAGTTGTCTTTCTTATACTGTTAAGTGTTTTCATATGGTTACTACCGAATTGCCGAAAAATATTCGAGTTTGGTCGTGGATCAGCTACTACAGACCCACAATTTATCACAGTCACTATGGGTAAATTTCTAGAGGATATAGAAAAGGAGAAACAAGTTATATTCACTAATCAGCAACTAAGGATCGCAACCGATAACTTCTCCTATTTGTTGGGGACCGGAGGTTTTGGAGCAGTTTATAAAGGAAGTTTCAGTAATGGAATCATGATAGCTGTTAAGGTTCTGCATGGAAGTTCTGGTAAGAGAAATGATCAACAATTTATGGCGGAAGTGGGTACTATCGGTAAAATTCATCACTTCAATCTTGTTAGACTATATGGATTTTGCTTCGAAAGAAATTTGATAGCACTTGTTTATGAATACATGGGAAATGGATCTCTTGACAAGTTTTTGTTCCAAGAGAACATGATTTTAGGATTTGAAAAGCTTCAAGAGATTGCAATTGGGACAGCCAAAGGAATTGCTTACTTGCATGAAGAGTGTCAACAAAGAATAATCCACTATGATATAAATTCAGGAAACATTCTCTTGGATACGAATTTCAACCCTAAAGTTGCTGATTTTGGTTTAGCAAAACTTTGCAATAGAGAAAATACCCACATAACGATGACCGGAGGAAGAGGGACGCCTGGTTATGCCGCACCTGAGCTTTGGATGCCATTTCCTGTAACTCACAAGTGTGACATTTATAGTTTTGGTATACTACTATTTGAAATTATAGGTAGGAGAAGAAACCATGATGTAAACCTTTCAGAAAGCCAAGAATGGTTTCCAATGTGGGTTTGGAAAAAATTTGATGCTGAACAAGTGAATGAATTAGTCACAGCTTGTAGGATTGAGGAGAAAAATATGGAGATTGTAGAGAGAATGGTTAAGGTAGCTTTGTCATGTGTTCAGTATAGGCCAGAATCAAGACCTACAATGAGTGTTGTGGTACAAATGTTGGAAGGTTTAATTGAAATACCAAAACCTTTGAATCCTTTTCAATATATGATTGATGGGACTTTTTCTTCTCTTCCAGTGCCAATATCACAGATTAATACTGATACAACTATTGGTTCTGGCTCTTCTGTGATGGTAACTGAATCTAGTGTTGAAGGTGTTACTCCTGTCATGACGAAGTACCAAGTCGAATTAGCATCTGTCTAA 1233 0.3731 MSTAVLIGAVVFLILLSVFIWLLPNCRKIFEFGRGSATTDPQFITVTMGKFLEDIEKEKQVIFTNQQLRIATDNFSYLLGTGGFGAVYKGSFSNGIMIAVKVLHGSSGKRNDQQFMAEVGTIGKIHHFNLVRLYGFCFERNLIALVYEYMGNGSLDKFLFQENMILGFEKLQEIAIGTAKGIAYLHEECQQRIIHYDINSGNILLDTNFNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPVTHKCDIYSFGILLFEIIGRRRNHDVNLSESQEWFPMWVWKKFDAEQVNELVTACRIEEKNMEIVERMVKVALSCVQYRPESRPTMSVVVQMLEGLIEIPKPLNPFQYMIDGTFSSLPVPISQINTDTTIGSGSSVMVTESSVEGVTPVMTKYQVELASV* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3478 410 Pfam Protein tyrosine and serine/threonine kinase 78 343 IPR001245 GO:0004672|GO:0006468
Mal4g3478 410 ProSiteProfiles Protein kinase domain profile. 73 347 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3478 410 PANTHER PUTATIVE-RELATED 5 407 - -
Mal4g3478 410 SUPERFAMILY Protein kinase-like (PK-like) 59 344 IPR011009 -
Mal4g3478 410 Gene3D Transferase(Phosphotransferase) domain 1 150 351 - -
Mal4g3478 410 ProSitePatterns Protein kinases ATP-binding region signature. 79 101 IPR017441 GO:0005524
Mal4g3478 410 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Mal4g3478 410 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 407 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3478 Mal-Chr4 102509357 102518926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3478 3 364 Receptor kinase-like Gene Family AT1G56120 40.811 3.11e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mal4g3478 PK_Tyr_Ser-Thr 9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3478 - - gmx:100819737 585.874