Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3477 ATGTCAAGCTCGGAAGATTTTGCAATTGAGGCTGTTGTAGTCATAGTAGTGATTGTTGTGAAGGTAGCTATTTTGATTTGTGTGTGTAGAAAAAGACATCAAATAAGTGGTGGATCAGATTCACAATTTATAACACTCACTATGGATAAATTTCTAAACGACATGGAAAGGGAAAAGCCAATAAGATTCACTGGTCAACAACTAAGAATTGCAACAGACAACTACTCCAACTTGTTGGGGTCAGGTGGTTTTGGAACAGTTTACAAAGGAATTTTCAGTAATGGAACAATGGTAGCTGTGAAGGTTTTGCGCGGTAGTTCTAACAAGAAAATTGACGAACAATTTATGGCAGAAGTTGGAACAATCGGTAGAGTTCATCACTTCAATCTTGTTAAGCTATATGGATTTTGCTTTGAGAAAAACTTGATAGCACTTGTTTATGAGTACATGGAGAATGGATCACTTGATAGGTATTTGTTTCATGAAAAAAATGCCTTAGGTTATGAAAAGCTTCATGAGATTGCAATCGGTACAGCCAGAGGCATTGCATACATGCATGAATTGTGCGAACATAGAATAGTCCACTACGATATAAAACCAGGAAATATTCTCTTGGATAGGAATTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCAAAACTTTGTAATAGGGAAAATACTCACATAACGATGACCGGAGGAAGGGGGACGCCTGGTTATGCCGCACCTGAGCTTTGGATGCCATTTCCTATAACTCACAAATGTGATGTTTATAGTTTTGGTATGCTGTTATTTGAAATTATAGCTAGGAGAAGGAACCTTGACATTAAAAATACAGAAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAATTTGATGCTGGACTATTGGAAGAGGCAATGATAGTTTGTGGAATAGAGGAGAAAAATAGAGAAGTTGCTGAGAGAATGGTTAAGGTAGCTTTATGGTGTGTTCAATATAGGCCAGAATTAAGGCCTATAATGAGTGTTGTGGTGAAAATGTTGGAAGGTTCATTGGAAATTCCAAAGACTTTTAACCCCTTTCAACATTTGATTGATGGGAATAAGTTTGCTACTCATTCAGTGCAAGTGTCACATACTTATACAACTAGTGTTTCTTCCTCTGCCTCTTCAGTTTTGGTAGGTGATTCAAGTATTGTATGTGCTACTCCTATTATGAGGAAGTATGAGATTGAATTGGCATCTAGCACAGCTTGA 1242 0.3728 MSSSEDFAIEAVVVIVVIVVKVAILICVCRKRHQISGGSDSQFITLTMDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGTIGRVHHFNLVKLYGFCFEKNLIALVYEYMENGSLDRYLFHEKNALGYEKLHEIAIGTARGIAYMHELCEHRIVHYDIKPGNILLDRNFNPKVADFGLAKLCNRENTHITMTGGRGTPGYAAPELWMPFPITHKCDVYSFGMLLFEIIARRRNLDIKNTESQEWFPIWVWKKFDAGLLEEAMIVCGIEEKNREVAERMVKVALWCVQYRPELRPIMSVVVKMLEGSLEIPKTFNPFQHLIDGNKFATHSVQVSHTYTTSVSSSASSVLVGDSSIVCATPIMRKYEIELASSTA* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3477 413 SMART serkin_6 73 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3477 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Mal4g3477 413 SUPERFAMILY Protein kinase-like (PK-like) 56 344 IPR011009 -
Mal4g3477 413 Pfam Protein kinase domain 77 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3477 413 ProSiteProfiles Protein kinase domain profile. 73 357 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3477 413 PANTHER PUTATIVE-RELATED 9 412 - -
Mal4g3477 413 Gene3D Phosphorylase Kinase; domain 1 47 149 - -
Mal4g3477 413 ProSitePatterns Protein kinases ATP-binding region signature. 79 101 IPR017441 GO:0005524
Mal4g3477 413 PANTHER RUST RESISTANCE KINASE LR10-RELATED 9 412 IPR045874 GO:0004672
Mal4g3477 413 Gene3D Transferase(Phosphotransferase) domain 1 150 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3477 Mal-Chr4 102494609 102495972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3477 62 361 Receptor kinase-like Gene Family AT5G38280 41.214 1.36e-76 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mal4g3477 Pkinase 7.5e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3477 - - gmx:100803355 647.506