Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3475 ATGTCAAGCAGTGGTGGTGATGTTGCAATTGTGGTTGTTCTATGCCTAGTAGTAATTGCTGTTAAGATAGCTATTTTGGTATGTGTGTGTAGAAAATTCAGAAGATATCAAGTAAGTGTTGAATCCATTCAAAAAATAAGTGCTGCATCCATTACTCCAAATCCACAATTTATAACACTCACTATGGATAAATTTCTAAACGACATGGAAAGGGAAAAGCCAATAAGATTCACTGGTCAACAACTAAGAATTGCAACAGACAACTACTCCAACTTGTTGGGGTCAGGTGGTTTTGGAACAGTTTACAAAGGAATTTTCAGTAATGGAACAATGGTAGCTGTGAAGGTTTTGCGCGGTAGTTCTAACAAGAAAATTGACGAACAATTTATGGCAGAAGTTGGAACAATTGGTAGAATTCATCACTTTAATCTTGTTAGGCTATATGGATTTTGCTTTGAGAAAAACTTGATAGCACTTGTTTATGAATACATGGAGAATGGATCACTTGATAGGTATTTGTTTCATGAAGAAAAGGCGTTAGGACATGAAAAGCTTCATGAGATTGCAATTGGTACGGCAAGAGGCATTGCTTACTTGCATGAAGAGTGCCAACATAAAATAATCCACTACGATATAAAACCGGGAAACATTCTCTTGGATAGGAATTTCAATCCTAAAGTTGCTGATTTTGGTTTGGCCAAACTTTGCAATAGGGAAAATAATCACATAACGATGACCGGAGGAAGGGGGACGCCTGGTTATGCCGCACCTGAGCTTTCGATGCCATTTCCTATAACTCACAAATGTGATGTTTATAGTTTTGGTATGCTATTATTTGAAATTGTTGGTAAGAGAAGAAACCTTGACATTAAAAATACTGAAGCCAAGAGTGGTTTCCAATTTGGGTTTGGAAAAAAATTGATGCTGGACTATTGGAAGAGGCAATGA 948 0.3703 MSSSGGDVAIVVVLCLVVIAVKIAILVCVCRKFRRYQVSVESIQKISAASITPNPQFITLTMDKFLNDMEREKPIRFTGQQLRIATDNYSNLLGSGGFGTVYKGIFSNGTMVAVKVLRGSSNKKIDEQFMAEVGTIGRIHHFNLVRLYGFCFEKNLIALVYEYMENGSLDRYLFHEEKALGHEKLHEIAIGTARGIAYLHEECQHKIIHYDIKPGNILLDRNFNPKVADFGLAKLCNRENNHITMTGGRGTPGYAAPELSMPFPITHKCDVYSFGMLLFEIVGKRRNLDIKNTEAKSGFQFGFGKKLMLDYWKRQ* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3475 315 PIRSF TyrPK_CSF1-R 81 192 - -
Mal4g3475 315 PIRSF TyrPK_CSF1-R 4 53 - -
Mal4g3475 315 PIRSF TyrPK_CSF1-R 175 284 - -
Mal4g3475 315 SMART serkin_6 87 301 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3475 315 Pfam Protein kinase domain 91 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3475 315 Gene3D Phosphorylase Kinase; domain 1 61 163 - -
Mal4g3475 315 ProSiteProfiles Protein kinase domain profile. 87 315 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3475 315 PANTHER PUTATIVE-RELATED 2 294 - -
Mal4g3475 315 Gene3D Transferase(Phosphotransferase) domain 1 164 306 - -
Mal4g3475 315 ProSitePatterns Protein kinases ATP-binding region signature. 93 115 IPR017441 GO:0005524
Mal4g3475 315 PANTHER RUST RESISTANCE KINASE LR10-RELATED 2 294 IPR045874 GO:0004672
Mal4g3475 315 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Mal4g3475 315 SUPERFAMILY Protein kinase-like (PK-like) 70 293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3475 Mal-Chr4 102428295 102429363 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3475 76 285 Receptor kinase-like Gene Family AT5G38280 45.794 4.02e-59 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-Os Mal4g3475 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3475 - - gmx:100816921 470.314