Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3469 ATGGCTTCTGGTGAAAAGGGTTCTATCTCACTAGACCAGATCAAGAATGAGACTGTTGATTTGGAACGAATTCCAATTGATGAAGTGTTTGAGCAACTGAAATGTACCAGAGAAGGTTTGTCCTCCACAGAAGGAGAAAACAGGATTCTAATATTTGGTCCAAACAAGCTAGAAGAGAAGAAGGAGAGCAAATTTCTCAAGTTTCTTGGGTTTATGTGGAATCCATTATCATGGGTGATGGAAGCTGCAGCTATAATGGCAATTGCTCTTGCAAATGGTGAAGGGCAGCCTCCAGATTGGCAAGATTTTGTGGGAATTGTTTGCTTGTTGGTTATCAACTCTACCATCAGTTTCATTGAAGAAAACAATGCTGGAAATGCTGCTGCTGCTCTTATGGCTGGTCTTGCTCCTAAGACAAAGGTACTTAGAGATGGTAAATGGAGTGAGCAAGAGGCTGCAATTTTAGTCCCAGGAGACATCATTAGCATCAAACTCGGTGACATCATTCCAGCCGATGCTCGTCTTCTAGAAGGAGATCCTTTAATGGTTGACCAAGCGGCATTAACAGGAGAATCACTTCCTGTAACAAGACATCCAGGACAAGAAGTTTTCTCTGGCTCAACTTGCAAACAAGGAGAAATCGAAGCCGTTGTCATAGCAACCGGTGTCCACACATTCTTCGGAAAAGCAGCACATTTAGTTGACAGTACAAACAATGTTGGACATTTCCAAATGGTTCTCAAATCAATTGGAAACTTTTGTATCTGTTCCATTGCAGTTGGGATGTTGGCTGAGATTATTGTCATGTATCCGATTCAACGCCGCAAATATCGCGAGGGAATTGACAACCTTTTAGTCCTTTTGATCGGAGGAATTCCTATTGCTATGCCAACAGTTTTGTCTGTAACAATGGCTATTGGTTCTCATAAACTTGCTCAACAAGGTGCTATTACAAAAAGAATGACTGCCATTGAGGAAATGGCTGGTATGGATGTTCTTTGCAGTGACAAGACAGGAACACTTACACTTAACAAATTGAGTGTTGATAAGAACTTGATTGAGGTGTTCGTAAAGGGTGTTGATAAGGACTATGTGATGCTTCTTGCTGCTAGAGCTGCTAGGACTGAAAATCAGGATGCTATTGATGCTGCCATTGTTGGAATGCTTGCTGACCCTAAAGAGGCGAGGGCCGGGATAAGAGAGGTGCATTTCTTGCCATTCAATCCTGTTGATAAGAGAACTGCTTTGACTTATGTTGATAATAGTGATGGAAGTTGGCATAGGGCTAGTAAAGGTGCTCCTGAACAGATCATGAACTTGTGTAACCTCAGGGAAAATGAAAAGAAGAAGGTTCATGCTATTATTGAAAAGTTTGCAGAAAGAGGGCTACGTTCACTTGGTGTTTCGAGACAGAAAGTTCCAGAGAAAACAAAGGAAAGTGCTGGTGGTCCATGGGAGTTTGTTGGTTTGTTGTCAGTGTTTGATCCTCCTAGGCATGACAGTGCTGAAACCATTAGAAGAGCTCTTAATCTTGGTGTAAATGTTAAGATGATTACAGGTGATCAACTTGCCATAGCTAAGGAAACTGGTAGGAGACTTGGTATGGGAACCAATATGTATCCATCTTCTACCTTACTTGGTCAAGACAAAGATGCAAATATTGCCACAATTCCAGTTGAAGAGCTGATTGAGACGGCAGATGGATTTGCCGGAGTTTTTCCAGAACATAAATATGAAATTGTTAAGAAGTTACAAGAGAGGAAGCACATTTGTGGAATGACTGGAGATGGTGTGAATGATGCACCTGCATTGAAGAAAGCTGATATTGGAATCGCTGTTGCTGATGCTACTGATGCTGCAAGAGGTGCTTCTGATATAGTCTTAACAGAACCTGGTTTGAGTGTTATCATCAGTGCAGTTTTGACAAGTAGAGCTATTTTCCAAAGAATGAAGAACTACACGATTTATGCAGTGTCTATCACTATCCGTATAGTGTTTGGATTCATGTTTATTGCACTGATATGGAAGTTTGACTTCTCTCCATTCATGGTTTTGATTATTGCCATTTTAAATGATGGAACAATCATGACAATTTCAAAGGACAGAGTTAAGCCATCTCCAATGCCTGATAGCTGGAAACTGAGAGAAATATTTGCTACTGGTGTCATGCTTGGAGGTTACTTAGCAACGATGACTGTGATATTCTTCTGGATAGTGAAAGACACTAAATTCTTCCCTGAAAAATTCGGAGTTAGGCATATTCATGACAGTCCTGATGAATTGACAGCTGCTTTGTATCTACAAGTTAGTATAGTTAGTCAGGCTTTGATCTTCGTCACTCGTTCGCGTAGCTGGTCTTACGTTGAACGCCCCGGGATGCTGTTAATGGGTGCTTTCCTCATTGCTCAACTGATTGCTACGTTGATAGCCGTATATGCCAACTGGGGCTTTGCAAGAATCCAAGGAATTGGTTGGGGTTGGGCAGGAGTCATCTGGCTCTATAGTATCATCTTCTACATTCCTCTTGACATCATCAAGTTCGCCATTCGCTATGGCTTGAGTGGCAAAGCTTGGTCAAATCTTCTCGACAACAAGACTGCCTTCACTACCAAGAAAGACTATGGTAAAGAAGAGAGGGAAGCTCAATGGGCTCATGCTCAAAGGACTCTTCATGGACTTCAACCACCAGAAAGTACTACTGGTGGTATCTTCAATGAGAAGAGCAATTATAGAGAATTGTCTGAGATTGCTGAGCAGGCCAAGAGACGCGCTGAAGTTGCGAGGCTTCGTGAACTTCACACCCTTAAAGGACATGTAGAATCTGTTGTGAAGCTCAAAGGATTGGACATAGACACTATACAACAACATTACACTGTGTGA 2880 0.4181 MASGEKGSISLDQIKNETVDLERIPIDEVFEQLKCTREGLSSTEGENRILIFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGEGQPPDWQDFVGIVCLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISIKLGDIIPADARLLEGDPLMVDQAALTGESLPVTRHPGQEVFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTNNVGHFQMVLKSIGNFCICSIAVGMLAEIIVMYPIQRRKYREGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLAQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVKGVDKDYVMLLAARAARTENQDAIDAAIVGMLADPKEARAGIREVHFLPFNPVDKRTALTYVDNSDGSWHRASKGAPEQIMNLCNLRENEKKKVHAIIEKFAERGLRSLGVSRQKVPEKTKESAGGPWEFVGLLSVFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSTLLGQDKDANIATIPVEELIETADGFAGVFPEHKYEIVKKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLREIFATGVMLGGYLATMTVIFFWIVKDTKFFPEKFGVRHIHDSPDELTAALYLQVSIVSQALIFVTRSRSWSYVERPGMLLMGAFLIAQLIATLIAVYANWGFARIQGIGWGWAGVIWLYSIIFYIPLDIIKFAIRYGLSGKAWSNLLDNKTAFTTKKDYGKEEREAQWAHAQRTLHGLQPPESTTGGIFNEKSNYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV* 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3469 959 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 39 812 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mal4g3469 959 CDD P-type_ATPase_H 39 847 IPR006534 GO:0008553|GO:0016021|GO:0120029
Mal4g3469 959 SUPERFAMILY Calcium ATPase, transduction domain A 137 234 IPR008250 -
Mal4g3469 959 PRINTS H+-transporting ATPase (proton pump) signature 766 787 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3469 959 PRINTS H+-transporting ATPase (proton pump) signature 594 610 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3469 959 PRINTS H+-transporting ATPase (proton pump) signature 451 469 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3469 959 PRINTS H+-transporting ATPase (proton pump) signature 566 582 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3469 959 PRINTS H+-transporting ATPase (proton pump) signature 625 650 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3469 959 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 851 IPR023298 -
Mal4g3469 959 Coils Coil 910 930 - -
Mal4g3469 959 Pfam E1-E2 ATPase 136 314 - -
Mal4g3469 959 ProSitePatterns E1-E2 ATPases phosphorylation site. 336 342 IPR018303 -
Mal4g3469 959 Gene3D - 331 631 IPR023214 -
Mal4g3469 959 SFLD C1.7: P-type atpase like 316 645 - -
Mal4g3469 959 PANTHER PLASMA MEMBRANE ATPASE 6 939 - -
Mal4g3469 959 Pfam haloacid dehalogenase-like hydrolase 330 608 - -
Mal4g3469 959 SMART Cation_ATPase_N_a_2 20 92 IPR004014 -
Mal4g3469 959 PRINTS P-type cation-transporting ATPase superfamily signature 334 348 - -
Mal4g3469 959 PRINTS P-type cation-transporting ATPase superfamily signature 489 500 - -
Mal4g3469 959 PRINTS P-type cation-transporting ATPase superfamily signature 617 629 - -
Mal4g3469 959 PRINTS P-type cation-transporting ATPase superfamily signature 184 198 - -
Mal4g3469 959 PRINTS P-type cation-transporting ATPase superfamily signature 511 521 - -
Mal4g3469 959 PRINTS P-type cation-transporting ATPase superfamily signature 594 613 - -
Mal4g3469 959 SFLD p-type atpase 316 645 IPR044492 -
Mal4g3469 959 Pfam Cation transporter/ATPase, N-terminus 24 86 IPR004014 -
Mal4g3469 959 Gene3D - 137 221 - -
Mal4g3469 959 Gene3D - 99 821 - -
Mal4g3469 959 Gene3D - 908 959 - -
Mal4g3469 959 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 106 352 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3469 959 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 569 683 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Mal4g3469 959 Gene3D - 346 494 IPR023299 GO:0000166
Mal4g3469 959 PANTHER CALCIUM-TRANSPORTING ATPASE 6 939 - -
Mal4g3469 959 SUPERFAMILY HAD-like 330 641 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3469 Mal-Chr4 102263520 102271213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3469 10 959 Primary Pumps ATPases AT4G30190 83.418 0.0 1612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3469 K01535 - gmx:100806580 1708.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5255 5 126563682 126570042 Mal4g3469 4 102263520 102271213 PCT