Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3397 ATGCAGCAAGATCATAGAAAAAAGGGTTCGACGGAGATGGACTTTTTCTCTGAATATGGCGATGCCAACCGGTACAAAATTCAAGAAGTCATTGGGAAAGGAAGTTACGGTGTTGTCTGTTCGGCCATTGACACTCACACCGGTGAAAAAGTAGCCATTAAAAAAATTCATGACATCTTCGAGCATATATCCGATGCTGCACGTATTCTCCGTGAGATAAAGCTGCTTAGACTTCTACGACATCCTGATATTGTTGAAATAAAACACATTATGCTGCCGCCTTCTAGGAAGGATTTCAAAGATATTTACGTTGTTTTTGAGCTTATGGAGTCAGATCTTCATCAAGTCATTAAAGCTAATGACGACTTAACGAAAGAGCACTATCAGTTTTTTCTTTATCAGTTGCTTCGAGCACTGAAATATATCCACACTGCGAATGTCTATCATCGAGATTTAAAGCCAAAGAATATACTGGCAAATGCAAACTGTAAACTTAAAATTTGCGATTTTGGACTAGCTAGAGTTGCCTTCAGTGACACACCAACAACTATATTTTGGACGGATTATGTTGCTACAAGGTGGTATAGAGCTCCAGAGCTATGTGGATCATTTTACTCAAAGTATACACCGGCGATTGATATATGGAGTATAGGTTGCATCTTTGCTGAAGTACTAACAGGAAAGCCACTTTTTCCTGGAAAAAATGTAGTCCATCAGTTGGATCTGATGACAGATCTGCTTGGGACTCCCTCACTGGATACCATATCACGGGTGCGCAACGAGAAGGCAAGGAGATACCTAACTAGCATGCGAAAAAAGCAGCCTGTGTCATTTGCACAGAAATTTCCCAATGCAGACCCTTTAGCACTACGACTATTGGAAAGGTTACTTGCTTTTGATCCAAAAGACCGGCCTACTGCTGAAGAGGCACTGGCCGACCCTTACTTCAAGGGACTGGCTAAAGTCGAGAGGGAACCGTCCTGCCAGCCTATCACCAAAATGGAGTTTGAATTTGAAAGACGAAGAGTCACAAAGGAAGAAATCCGAGAGCTAATTTTCCGCGAAATTTTAGAGTATCATCCTCAACTTTTGAAAGACTACTTGAATGGAACGGAGAGAACTAATTTTCTCTATCCAAGTGCTGTGGATCAGTTCAGAAAGCAGTTTGCTCATCTAGAGGAAAATGGTAAAAACGGTCCTGTAGCGCCACTTGATCGAAAACATGTTTCTCTTCCAAGGTCAACAATTGTACATTCAAATACGGTACCCCGAAAAGAGCAAACAAGTATCGCTTCCAGCAAAAACCGACAAACACCTGAGGAATATAATAAGATCTCTAGAGACACCGAAATTCCAATGCCAAGGCCGATCCAGGGACCACAAAAAATTCCTCTAGCAAAACCTGGTAAAGTTGTTGGGCCAGTTGTTCCGTTCGAGTATGGAAATGTTGTTAAGGATTCTTACGATCCAAGGGCGTTTATCAGAGGTTCTGTGCTTCCTCCTCAACCTGTTCCACATGAATATTACTTTCCAAAGCCTGGTAGCACTGCAAATCAAGAAAGGCCAACAACAGGAGCTGATAAGGGTGTGCCTTTGCAAGCGAAACATGGACAACAATGCGGAATCAAAGGTTCTGTGCTTCCTCCTCAACCCGTTCCACATGAATATTACTTTCCAAGGCCTGGTAGCACTGCAAATCAAGAAAGGCCAACAACAGGAGCTGATAAGGGTGTGCCTTTGCAAGCGAAACATGGACAACAATGCGGAATGAATGCAAAAATAGGACAAGAAATAGCCATTAATATTGATACAAATCCCTTTTTCATGACAAGGGTAGGAGTGAACAAGTTAGAAAACGATGATCAAATTGCAATAGAGACAAACATGTTGCAATCAAAGGCTCAATATGGAGTTAATGCTGCATCTGGTGCCGCTGCTCACAGAAAAGCTGGACCTATTCAATATGGTATGTCAAGAATGTTCTAG 1986 0.4194 MQQDHRKKGSTEMDFFSEYGDANRYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKIHDIFEHISDAARILREIKLLRLLRHPDIVEIKHIMLPPSRKDFKDIYVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFYSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPVSFAQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPITKMEFEFERRRVTKEEIRELIFREILEYHPQLLKDYLNGTERTNFLYPSAVDQFRKQFAHLEENGKNGPVAPLDRKHVSLPRSTIVHSNTVPRKEQTSIASSKNRQTPEEYNKISRDTEIPMPRPIQGPQKIPLAKPGKVVGPVVPFEYGNVVKDSYDPRAFIRGSVLPPQPVPHEYYFPKPGSTANQERPTTGADKGVPLQAKHGQQCGIKGSVLPPQPVPHEYYFPRPGSTANQERPTTGADKGVPLQAKHGQQCGMNAKIGQEIAINIDTNPFFMTRVGVNKLENDDQIAIETNMLQSKAQYGVNAASGAAAHRKAGPIQYGMSRMF* 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3397 661 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3397 661 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Mal4g3397 661 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3397 661 MobiDBLite consensus disorder prediction 418 439 - -
Mal4g3397 661 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Mal4g3397 661 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3397 661 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Mal4g3397 661 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 491 - -
Mal4g3397 661 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Mal4g3397 661 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Mal4g3397 661 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Mal4g3397 661 MobiDBLite consensus disorder prediction 509 530 - -
Mal4g3397 661 MobiDBLite consensus disorder prediction 418 465 - -
Mal4g3397 661 CDD STKc_TDY_MAPK 24 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3397 Mal-Chr4 99693288 99698936 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3397 1 445 MAP Kinase Gene Family AT2G42880 87.668 0.0 802
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Mal4g3397 Pkinase 7.5e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3397 - - gmx:100811788 1076.62