Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3388 ATGGAGAATATTGGTGATGAGTTCAAGCATTACTGGGAAACAAACTTGTTCCTCCAAACCCAAGAGCTTGATAGTTGGGGATTGGATGAAGCTTTTTCAGGGTACTATGATTCAAGCTCTCCTGATGGTGCAGCATCATCAGCAGCTTCATCTAAGAACATAGTTTCTGAGAGGAATAGAAGGAAGAAGCTTAATGAAAGACTCTTTGCACTTAGAGCAGTGGTCCCCAACATTAGCAAGATGGATAAAGCTTCAATTATTAAGGATGCTATTGAGTACATACAGCACTTGCATGAGCAAGAGAAGATTATTCAAGCTGAGATAATGGAACTTGAATCTGGGATGCCTAATAATATTAATCCAAGCAATGATTTTGATCAGGAGCTTCCTGTGTTGCTAAGGTCCAAGAAGAGAACAGATCAGTTATATGATTCTATCAGTTCAAGAAACTTTCCAATTGAAGTCCTTGAGCTTCGGGTTACATACATGGGAGAGAATACAATTGTAGTGAGCTTGACATGTAGCAAAAGGACAGACACAATGGTAAAATTGTGTGAAGTTTTCGAATCTTTGAAGCTCAAAATTATCACTGCCAATATCACTTCCTTTTCTGGCAGGCTTTTGAAGACAGTCTTCATTGAGGCAAATGAAGAAGAGAAAGATCCATTGCAGATAAAGATCCAAACAGCCATTGCAGCTCTTAATGATCCTCTAAGCCCTATGAGCATCTAA 732 0.3907 MENIGDEFKHYWETNLFLQTQELDSWGLDEAFSGYYDSSSPDGAASSAASSKNIVSERNRRKKLNERLFALRAVVPNISKMDKASIIKDAIEYIQHLHEQEKIIQAEIMELESGMPNNINPSNDFDQELPVLLRSKKRTDQLYDSISSRNFPIEVLELRVTYMGENTIVVSLTCSKRTDTMVKLCEVFESLKLKIITANITSFSGRLLKTVFIEANEEEKDPLQIKIQTAIAALNDPLSPMSI* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3388 243 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 1 237 - -
Mal4g3388 243 SMART finulus 54 103 IPR011598 GO:0046983
Mal4g3388 243 Pfam Helix-loop-helix DNA-binding domain 55 98 IPR011598 GO:0046983
Mal4g3388 243 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 50 114 IPR036638 GO:0046983
Mal4g3388 243 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 48 97 IPR011598 GO:0046983
Mal4g3388 243 Gene3D - 47 119 IPR036638 GO:0046983
Mal4g3388 243 PANTHER TRANSCRIPTION FACTOR BHLH35 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3388 Mal-Chr4 99272738 99292480 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3388 1 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G57150 66.820 9.91e-89 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g3388 HLH 4.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3388 - - gmx:100817978 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3388 4 99272738 99292480 Mal4g3388 4 99272738 99292480 ECH