Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3381 ATGTTTTCTCTTTTTCGGAAAAACCTCCCTTTTTGTCGTTCCTCCTCCTCCTCATCATCGCAAGTTCTCAAGTTTTTTATTAGGTTTAAAGCGCGTGAGTTCTCATCATTATCATCTTCTCCTCCTCCCTCCGAAGCTGTCAAGGTTTTTGCATGGTGGGATGTTGACGTTAGCTTTTCTAAGGTAGCACCTTCAATTATAGCAGCCCTTAGAGCTAACGGGATCATGGGTGAGGTTAAGATTCACGCTTGGGTCAATTATTATTCTCCAAAGGTCAACCACGAGGCAAGAGAGGCACTTAAATCAACCGGCATTTCTCTCCGGCCCATTTTTGGAGCTGGAAATAACAATTCCTATACATGTCTTCTTATGAAACTTGAGGATTGGCTTCACATGAATCCTCCACCCGCACACCTCTTTTTCATATTTGGTGATGTATACTTCTCTGGAATATTGAATAAGTTAAGAATGCGTAACTACAATATCTTGCTTGCATGTCCAGACCCAAAAAGGGCTCATGTTGCTCTCTGCCATGCAGCAACTATAATCTGGCAATGGTCTTCGATGCTCAAGGGGGAAGATCTTATAGGAAAACATTTCAACTATCCTCCTGATGATCCGTTTAATAATTCTTGGTATGGAATCTCAAATGTGCCTCTTAAAAACCCCTTCTCAGTTGCTGAGCAGCTCACATCATCACAAAATGCGGAGATTTACAAACCTTCCTCGGACATAAAGGTAGGTGAAGCTTCAAATTCAGTTTCTAGGCAGGTCATGAAGATATTGAGTTTGCACCCGAAAGGGATCTCCATTGGAGACCTTCGTGCAAAATTGGGTAAACGCTTCTATGGATATAAAAAGTTTTCCAACATTCTAATATCTATACCACATTTACAACTCGAGTATTTAGGAGAAGGTAATTTTTGGGTGTGTTTGGTCTCGACAAGGACATCAACTATTAAGAACAAGCAGGAGGACACCACTACAACTCAAAAGCTACACAATGATGTTAGTCATCCTCCGCAACCTCATTGGGATAACATTAGGGTTTCAGTATGGTGGGACTTCGACAGTTTTCCCGTCCCTTCCGACGTTAGCTTTTTAAATGTAGCACCTTCAATTATGGGAGTTCTTAGAGCTAACGGGATTAAGGGCCCTATTCATATTGACGCTTATGGCAATGTTTCTCATCTTTCAGAGATCCAACAAGAAGCACTTTTCTTCTCCGGCATTGATCTCCACCACATTTACGGTGGAAAGAAAAACTCTCATAAATGGCTTATGGATTGGGCTTGTCAAAATCCTCCACCCGGACACCTCTTTCTGATATCTGGTGATAGAGACTTATACATCAATAGCACAACGTACAAGTTATGGAATCGTAAATTCAATATATTACTTGCATGTCCAAGAATGGATTATTTTCCTAGCCACCATATTGCAACCATAGTGTGGCAGTGGTCTTCAATGCTCAAGGGGAAATATCTTACTGGAAAATATTGCGATTATCCGCCTCGTTGGTATATTAAGGTCCCTCATGAATATCCTCCTGAGTGGTATAGAAACTCTAAGGTGCTTCTTGAAAACCCCTTCTCAACTGTTGAGGAGCCCACATCTTCAAAAAATGCAGAGATCCACGAACCTTCCTCGTACATAAAGTTAGTTGAAGTTCCAAAGTCACTTTGCAGGCAGGTTAGGAAGATATTGAGTTCGTACCCGAACGGGATCGCCATTGGAGATCTTCACTTACAGTTCAAATTGAGTTATTTGTACAATTTGAGTAAAGGCTTCTGTACACAAAAAGTGTTTTCCAACATTCTAGTATCTATACCACATGTACAACTCCTGTATATAGGAGAAGGTGATTTTTGTGTGCGTTTGAATAAGGAGAGGGCAGTTAAAAATAAGCAGAAGGGTGTTGATCATCCAGGAATGCCTGCATTGTTTTCTAGTGGTTCCTTTTGGGATGATGTGGAATCTTTTGTTTTCACATCCAGAAGATCACGTCTTATTTCCCGATCAATAAGCAGGTTTGCTAGTTTTGTACTTTCTTCATAA 2058 0.4082 MFSLFRKNLPFCRSSSSSSSQVLKFFIRFKAREFSSLSSSPPPSEAVKVFAWWDVDVSFSKVAPSIIAALRANGIMGEVKIHAWVNYYSPKVNHEAREALKSTGISLRPIFGAGNNNSYTCLLMKLEDWLHMNPPPAHLFFIFGDVYFSGILNKLRMRNYNILLACPDPKRAHVALCHAATIIWQWSSMLKGEDLIGKHFNYPPDDPFNNSWYGISNVPLKNPFSVAEQLTSSQNAEIYKPSSDIKVGEASNSVSRQVMKILSLHPKGISIGDLRAKLGKRFYGYKKFSNILISIPHLQLEYLGEGNFWVCLVSTRTSTIKNKQEDTTTTQKLHNDVSHPPQPHWDNIRVSVWWDFDSFPVPSDVSFLNVAPSIMGVLRANGIKGPIHIDAYGNVSHLSEIQQEALFFSGIDLHHIYGGKKNSHKWLMDWACQNPPPGHLFLISGDRDLYINSTTYKLWNRKFNILLACPRMDYFPSHHIATIVWQWSSMLKGKYLTGKYCDYPPRWYIKVPHEYPPEWYRNSKVLLENPFSTVEEPTSSKNAEIHEPSSYIKLVEVPKSLCRQVRKILSSYPNGIAIGDLHLQFKLSYLYNLSKGFCTQKVFSNILVSIPHVQLLYIGEGDFCVRLNKERAVKNKQKGVDHPGMPALFSSGSFWDDVESFVFTSRRSRLISRSISRFASFVLSS* 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3381 685 CDD PIN_limkain_b1_N_like 349 470 - -
Mal4g3381 685 CDD PIN_limkain_b1_N_like 48 167 - -
Mal4g3381 685 Pfam NYN domain 55 180 IPR021139 GO:0004540
Mal4g3381 685 Pfam NYN domain 349 449 IPR021139 GO:0004540
Mal4g3381 685 PANTHER LIMKAIN B LKAP 346 638 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal4g3381 685 PANTHER LIMKAIN B LKAP 13 336 IPR024768 GO:0005777|GO:0010468|GO:1903231
Mal4g3381 685 PANTHER EMB|CAB71880.1 13 336 - -
Mal4g3381 685 PANTHER EMB|CAB71880.1 346 638 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3381 Mal-Chr4 99055979 99063248 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3381 349 493 C2H2 Transcription Factor Family AT5G61190 37.013 4.37e-19 90.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3381 - - mtr:MTR_7g077430 409.068