Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3379 ATGGACAAAGATACATCAAATTTATTTGATACATTAGAAGAAGGTAAATTTTTTTATGAAAAATACGCACTCTCTGTCGGATTTAGTGTGCGTTCATCATCATCAACTATAGATAAAAACGGCGTGAAGCGTTGGAAGTATTTTGTTTGCTCGAAAGAGGGTTATTTGCGAAATAAGATGGATGATAAGGAGCAAAGTGAATCTACTGTCAAGGCTAAAAGAAGAAGGGCTTTAACAAGAGAAGGATGCAATGCAAATGTTGTTTTCAAATGGGTGGGGGAAGGTAAGTATGAGATAGCTCGATTTCATGAAAGCCATACACATCCACTTGCTTCACCTATAAAGAGACCGTTTCTAAGGTCTGCAAGGAAAGTGAATTCCAGTCACAAAAGCTTATTACTTGCATGTAGTAGAGCAAATATTGGACCTTCAAAAGCTTTCCACTTATTAAAAGAACAGTGTGGGGATCTTCAAAACTATTCCAGATATTTAAAGAGTTTGAATAAAGATTCTGATGCACATGTTTTGATAGATTACTTTAGAAGGAAGCAAGAAGTTAATCCATCCTTTTATTATGCGTATGAGGTAGGTGAAGAAGGCCGATTGAAGCATGTTTTTTGGGCAGATGTAGGACTTATAACAAATGAGAAAAGTGATTCATTTGTATGGTTGTTTGAAAAGTTTTTGGAAGCAATGGGTGGACATAAGCCAACTCTTATAATAACCGATCAAGATCCTTCCATGAAAATGGCTATAGAAAAGATTTTTGATACTTCTACTCATAGATTGTGCATGTGGCATATCATGAAAAAAGTTTCTGAAAAAGTAGGTGTGTCCACGAATGATGATGATGAGTTCAACAAAAGTTTCAAGCCATGTGTTTGGGGTTCAGAGACACCAAATGAGTTTGAAGAGACTTGGGAGTTTTTGATGACAAGGTTTGATTCAGCAATAGAAGCGCAACGACATAAGGAGTTACTGGCTGATAATAAGTCAATTCATTCTAAACCGAAACTAAAGTTGGAACGTGGTATAGAGAGGCATGAAATAGACGTGTATACTCGTGAGAACTTTTATATATTTCAACATGAATTATGGATTGCATGTGTGGATTGTGGGATTGAAAATAAGAAAGATGAAGATGGGATGGAAATATTTCATATATATGATAATAGTGAGATCAATGGTAAACTTCGAGAAGTGGTGTATAACTTGTCTGATCAAAATGCAAATTGCTCATGCAAAATGTTTCAGGATGAAGGAATACCTTGTAGACACATACTTTATGTTTTAAAGGGAAAAAATTTCAATGAAATACCAATTTGCAAACAGAACACCTATTTTGACATAGCTGACAATGTCTGGGAAGAAGATAGCAAACTCATTTATGATGTTTGGAACCACTTACATAGCTGTGTGGAGAAGGCTGGAAAAGATAAGGAAAAATTACTTCTTGTGTTAGATGAAGCTGTTAACATGGAAAAACAATTAGACGAGTTTGAAGGGAGATCTAAGAGAACCAAGACAAATGATTTGATTCTTGGGTCCAATATTCCTGACGAAGTAGAAATCCTTCCACCAAAATTTGCAAAGACTAAAGGTAGTGGTAAAAGCATCAAAGCAAGACATTGTAAGGCATGTGGTGAGTATGTGCATCATGACAACCGCAATTGTCCCCAAAGATCATCTCCATAA 1695 0.3581 MDKDTSNLFDTLEEGKFFYEKYALSVGFSVRSSSSTIDKNGVKRWKYFVCSKEGYLRNKMDDKEQSESTVKAKRRRALTREGCNANVVFKWVGEGKYEIARFHESHTHPLASPIKRPFLRSARKVNSSHKSLLLACSRANIGPSKAFHLLKEQCGDLQNYSRYLKSLNKDSDAHVLIDYFRRKQEVNPSFYYAYEVGEEGRLKHVFWADVGLITNEKSDSFVWLFEKFLEAMGGHKPTLIITDQDPSMKMAIEKIFDTSTHRLCMWHIMKKVSEKVGVSTNDDDEFNKSFKPCVWGSETPNEFEETWEFLMTRFDSAIEAQRHKELLADNKSIHSKPKLKLERGIERHEIDVYTRENFYIFQHELWIACVDCGIENKKDEDGMEIFHIYDNSEINGKLREVVYNLSDQNANCSCKMFQDEGIPCRHILYVLKGKNFNEIPICKQNTYFDIADNVWEEDSKLIYDVWNHLHSCVEKAGKDKEKLLLVLDEAVNMEKQLDEFEGRSKRTKTNDLILGSNIPDEVEILPPKFAKTKGSGKSIKARHCKACGEYVHHDNRNCPQRSSP* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3379 564 Pfam SWIM zinc finger 409 430 IPR007527 GO:0008270
Mal4g3379 564 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 324 440 IPR031052 GO:0006355
Mal4g3379 564 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 211 315 IPR031052 GO:0006355
Mal4g3379 564 Pfam MULE transposase domain 201 271 IPR018289 -
Mal4g3379 564 SMART 26again6 410 437 IPR006564 GO:0008270
Mal4g3379 564 Coils Coil 490 510 - -
Mal4g3379 564 Pfam FAR1 DNA-binding domain 18 111 IPR004330 -
Mal4g3379 564 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 9 125 - -
Mal4g3379 564 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 211 315 - -
Mal4g3379 564 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 324 440 - -
Mal4g3379 564 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 9 125 IPR031052 GO:0006355
Mal4g3379 564 ProSiteProfiles Zinc finger SWIM-type profile. 399 435 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3379 Mal-Chr4 99028561 99031338 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g3379 FAR1 1.2e-18 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3379 - - soe:110798711 446.432