Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3358 ATGCCTCTCCGAATACTCCAAGGGGAAGCTTCTTTACCCTCAAATGATGAGTCAAAGAAATCAAGTGAGCACAAACGTGAAACAATGTTCTTTGTTCTTGGAGGGATAGTATTGGTCACTATAATATTGATTCTTGGTTGGATTGTATTTAGAAAACGTGTGAAACGATCACCAAAGCCAGTGGCAAAAACAGTTCCTAGTGAAGCTGAACCTACAGAGGTGATGAAGGTGATATTTCCATCCAAACAACAATCATCAGGGTCAATGGAGTTCTTTAGTGGGAGCCTTCGATCTATTAGCTACTTTGACTACCAGACATTGAGGAAGGCTACCAATAACTTTTTTCATGGAAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTATAAGGGAAAGTTGGAAGATGGAAGGATGATTGCTGTTAAGGCATTGTCTCTTAACAAATCCCAACAAGGAGAAAGAGAATTTTTGGCTGAGGTTAAATTGATCACAAGTATCCAACACAAAAATTTGGTTCGCCTTCTTGGAAGTTGCATAGATGGTCCTCAAAGGATAATTATCTATGAATATATGCAAAACCGAAGTTTGGACCTCTTCATATATGGAAACAATGATCGATTTCTGAATTGGAGCACTAGGTATCAAATCATACTTGGAGTAGCACGTGGACTTCAATACCTTCATGAAGATTCACACCTAAGAATTGTTCATCGAGATATCAAAGCAAGCAACATTCTTCTTGATGACAAGTTTCTGCCAAAAATTGGAGACTTTGGGCTAGCAAGGTTTTTCCCAGAAGACCAAGCTTATCTTAGCACACAGCTTGCAGGAACATTAGGCTATACAGCTCCTGAATATGCTATTAGAGGGGAATTGTCAGAAAAGGCTGATATATATAGTTTTGGAGTTCTCCTTCTTGAAATTATATGTTGCAGGAAAAATACAGATCATACTTTACCACCAGATATGCAGTACCTCCCTGAATATGCATGGAAACTATATGAGAAATCAAGTTTATTGGATCTTGTTGATCCAAAGCTAAAACAAGATGGATTTGTTGAAAAGGATGTTATGCAAGCAACCCATGTGGCTCTCTTATGCCTTCAACCTCATGCACATTTGAGACCACCAATGTCAGAAATTGTGGCATTGTTGACATTCAAAATTGAAATGGTTACAACACCAATGAGGCCAGCCTTCCTCGATCGAAGGCCAAGGAAGGATGAAGATAACCATTCATTTGAAGTGTCTTCTGTGGCAATCCACTAA 1269 0.3916 MPLRILQGEASLPSNDESKKSSEHKRETMFFVLGGIVLVTIILILGWIVFRKRVKRSPKPVAKTVPSEAEPTEVMKVIFPSKQQSSGSMEFFSGSLRSISYFDYQTLRKATNNFFHGNLLGSGGFGPVYKGKLEDGRMIAVKALSLNKSQQGEREFLAEVKLITSIQHKNLVRLLGSCIDGPQRIIIYEYMQNRSLDLFIYGNNDRFLNWSTRYQIILGVARGLQYLHEDSHLRIVHRDIKASNILLDDKFLPKIGDFGLARFFPEDQAYLSTQLAGTLGYTAPEYAIRGELSEKADIYSFGVLLLEIICCRKNTDHTLPPDMQYLPEYAWKLYEKSSLLDLVDPKLKQDGFVEKDVMQATHVALLCLQPHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLDRRPRKDEDNHSFEVSSVAIH* 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3358 422 ProSiteProfiles Protein kinase domain profile. 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3358 422 SMART serkin_6 114 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3358 422 Gene3D Transferase(Phosphotransferase) domain 1 191 394 - -
Mal4g3358 422 PANTHER RECEPTOR-LIKE KINASE 93 398 - -
Mal4g3358 422 CDD STKc_IRAK 120 386 - -
Mal4g3358 422 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 93 398 - -
Mal4g3358 422 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Mal4g3358 422 Pfam Protein tyrosine and serine/threonine kinase 118 383 IPR001245 GO:0004672|GO:0006468
Mal4g3358 422 SUPERFAMILY Protein kinase-like (PK-like) 89 388 IPR011009 -
Mal4g3358 422 Gene3D Phosphorylase Kinase; domain 1 75 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3358 Mal-Chr4 98349466 98356184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3358 102 414 Receptor kinase-like Gene Family AT1G56120 47.923 6.50e-101 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mal4g3358 PK_Tyr_Ser-Thr 1.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3358 - - gmx:100791042 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5191 5 125817027 125820111 Mal4g3358 4 98349466 98356184 PCT