Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3351 ATGATACAAACTAATCTTTATTCTGTATCTTCTCATATGCCTTTTGATCTTAATAATAATGAAGATCGCAATCACCACCATCCTCTCTTCAATACAAATATTCATCAACCCTCTTCATCTTCTTCTCTTTCATACTCAATACTCTTCAACGAAAATCAAGATCACGGAGGATCTTGTTCCGGGGAACCAAACCACATACAAAGTGATCATCTAAAGGTTGATAAGTTTGTTCCTTCTAGTGGATCATGGGATCAAGAAGTGGAAAAGGATGATAAAGTTTGGAAGAAAGAAGATGGGAATGATAATTTTGAAGTTGATGACATTAATCAAGTGAAGTGGATGCCTTCAAAGAAGAGAATTATTCAGAGAATGATGAAAGATCAAAGGGGTTCTGAGCGCAAATATGATAAACAAAAGCGATTAGTGTCATATGAAGGAACAAATACTAGTAGCAACAACAATTCTTCAAACAACAACACTGTTAGAGTTTGTACTGATTGCCACACAACTAAGACCCCTGTTTGGAGAAGTGGACCCACAGGTCCTCAGTCACTCTGCAATGCTTGTGGGATTCGACAAAGGAGAGCGAGACGCGCCTTTGGAGCTGCTCCAACATCTGCAAATGATGAGTCTAATGAGGAAAAACCTCATGTGAAGGAAAAGAAGATGCAAATCAAAAGGAAAAGGTCAAAATCTGATCAATGTGCACAACAATTGAAAAGGAAGGGTAAAATTGGAAACAAGTGTACTAGTTTTGAAGATTTGATAACAAGCTTGAGTGACAACTTGGCTTCCTATCAAGGTTTTCCTCAAGATGAGAAGGATGCTGCAATTCTACTTATGGCTTTGTCTTCTGGCTTACATCATGGATAA 873 0.3792 MIQTNLYSVSSHMPFDLNNNEDRNHHHPLFNTNIHQPSSSSSLSYSILFNENQDHGGSCSGEPNHIQSDHLKVDKFVPSSGSWDQEVEKDDKVWKKEDGNDNFEVDDINQVKWMPSKKRIIQRMMKDQRGSERKYDKQKRLVSYEGTNTSSNNNSSNNNTVRVCTDCHTTKTPVWRSGPTGPQSLCNACGIRQRRARRAFGAAPTSANDESNEEKPHVKEKKMQIKRKRSKSDQCAQQLKRKGKIGNKCTSFEDLITSLSDNLASYQGFPQDEKDAAILLMALSSGLHHG* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3351 290 ProSiteProfiles GATA-type zinc finger domain profile. 158 194 IPR000679 GO:0006355|GO:0043565
Mal4g3351 290 ProSitePatterns GATA-type zinc finger domain. 164 189 IPR000679 GO:0006355|GO:0043565
Mal4g3351 290 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 1 290 - -
Mal4g3351 290 CDD ZnF_GATA 163 191 IPR000679 GO:0006355|GO:0043565
Mal4g3351 290 PANTHER GATA TRANSCRIPTION FACTOR 21-LIKE 1 290 - -
Mal4g3351 290 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 157 197 - -
Mal4g3351 290 SMART GATA_3 158 212 IPR000679 GO:0006355|GO:0043565
Mal4g3351 290 MobiDBLite consensus disorder prediction 201 220 - -
Mal4g3351 290 Gene3D - 158 248 IPR013088 GO:0006355|GO:0008270
Mal4g3351 290 Pfam GATA zinc finger 164 197 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3351 Mal-Chr4 98133899 98136579 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3351 109 290 C2C2-Gata Transcription Factor Family AT4G26150 35.545 6.26e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mal4g3351 GATA 1.2e-14 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3351 - - gmx:100780875 244.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5182 5 125757815 125759383 Mal4g3351 4 98133899 98136579 PCT