Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3333 ATGTCTCACAGGAAGTTCGAGCACCCAAGACACGGTTCTTTGGGATTTCTCCCAAGGAAGCGTGTTGTTCGTCACAGAGGAAAAGTGAAGGCTTTCCCTAAGGATGACCCAACCAAGCCACCAAAGCTAACTGCCTTCTTGGGTTACAAGGCTGGTATGACCCACATTGTCAGAGAAGTCGAGAAGCCTGGATCCAAACTTCACAAGAAGGAGACTTGTGAGCCTGTGACAATCATTGAGACCCATCCAATGGTTGTTGTTGGTGTTGTGGGTTATGTGAAAACTCCCCGTGGTCTTCGAACATTGAACACTGTATGGACTCAGCATTTGAGTGAGGAAATTAAGCGTAGGTTCTACAAGAACTGGTGCAAGTCCAAGAAGAAGGCTTTCAGCAAGTACTCAAAGCAGTATGAAAGTGATGAGGGGAAGAAAAACATTCAGACCCAGCTTGAGAAACTGAAGAAGTATGCAACTGTTATCCGTGTGTTGGCTCACACTCAGATCAGGAAAATGAAGGGATTGAAGCAGAAGAAGGCCCATATCATGGAGATTCAGAAGGTGGACTTTGCACACAGTTTCTTTGAGAAGCAGGTTCCTATTGATGCTGTGTTCCAGAAGGATGAAATGATTGACATCATTGGAGTAACCAGGGGTAAGGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCGTCTTCCTCGTAAGACTCACAGGGGTTTGAGGAAGGTTGCATGTATTGGAGCTTGGCATCCTGCTAGAGTTTCTTTCACTGTTGCAAGGGCTGGTCAGAACGGATACCATCACAGAACTGAGTTGAACAAGAAAATTTACAAGCTCGGCAAATCTGATGATCAAGGGAGGCTGTGTTGGTCCCAAGAAGAGGGTTATTACTCTGCGTCAGATATCAAACTCAAGTTTATCGATACCTCTTCCAAGTTTGGACATGGTCGTTTCCAGACAACATCAGAGAAGAAAAAGTTCTATGGACGTCTCAAAGCTTAA 1005 0.4517 MSHRKFEHPRHGSLGFLPRKRVVRHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETHPMVVVGVVGYVKTPRGLRTLNTVWTQHLSEEIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVLAHTQIRKMKGLKQKKAHIMEIQKVDFAHSFFEKQVPIDAVFQKDEMIDIIGVTRGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKSDDQGRLCWSQEEGYYSASDIKLKFIDTSSKFGHGRFQTTSEKKKFYGRLKA* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3333 334 ProSitePatterns Ribosomal protein L3 signature. 204 227 IPR019926 -
Mal4g3333 334 Gene3D - 85 194 - -
Mal4g3333 334 Gene3D Ribosomal protein L3, domain 3 1 84 IPR044892 -
Mal4g3333 334 Pfam Ribosomal protein L3 1 286 IPR000597 GO:0003735|GO:0005840|GO:0006412
Mal4g3333 334 SUPERFAMILY Translation proteins 4 282 IPR009000 -
Mal4g3333 334 PANTHER 60S RIBOSOMAL PROTEIN L3-1 301 334 - -
Mal4g3333 334 PANTHER 60S RIBOSOMAL PROTEIN L3-1 1 286 - -
Mal4g3333 334 Gene3D Translation factors 288 334 - -
Mal4g3333 334 Gene3D Ribosomal protein L3, domain 3 195 264 IPR044892 -
Mal4g3333 334 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 301 334 IPR045077 GO:0003735|GO:0005840|GO:0006412
Mal4g3333 334 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 1 286 IPR045077 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3333 Mal-Chr4 97507366 97508431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3333 1 332 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 70.543 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3333 K02925 - gmx:100819132 543.888