Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3325 ATGCGGGATACTGAGAAGTTAAATAATCAAGGATCTACAAAATCGAGTAACTCAAAGGAACATATCAAGTTGAAGGTAGATTCACCGCAGTTCAAAACAAGTAGCACAAAACACCAAAAGAAGAAACACAGACTGAAATCAAAATCTCATAAAGTAAGAGGTTGCACAAATGTGTCAGCGAGGACAGCTACTGATTCTTCCAACAAGGCGCCAAACAAGGATTCTTCAAATAAAAGATTGATTATTAAACAAAATCTACATAAAACTGATGGGAATTCAACACAGGTTCAGCCTTCAGCAAAGATACAAGGAGGAAAACATTCTCTTAATAATGATAGGAAAGGTGAGAAAGATGTTGATCAAGAGGCAAATGTTCAAAAACGTAAGAGAAGGAGAAAGAAGAAAAGACAAAGACATGATGTAGAGCTTGATGATACTGTACGCCTCCAGAGGAGAACAAGGAATATCTTAATCAGAATGAAGCTAGAGCAGAACCTTATTGATGCTTACTCTGGAGAAGGTTGGAAAGGTCAGAGTCGAGAGAAGATTAGGCCAGAAAAGGAGCTACAAAGAGCAAAAAAGCAGATTTTGAAATGCAAGCTTAGTATCCGTGATGCCATTCGCCAACTGGATTCTCTTAGTTCAGTTGGTAGTATTGAAGGTTCTGTCATTGCTACAGATGGATCTGTTTCTCATGAACATATATTCTGTGCAAATTGCAAGATGAACGAAGTTTCTCCAGATAATGATATTATACTATGTGATGGCTCATGCAATCGCGCGTTTCACCAGAAATGTCTTGATCCTCCTTTGGATACTGAAAACATTCCTCCTGGAGACCAAGGCTGGTTTTGCAAGTTTTGTGATTGTAAGATAGAAATATTGGAGGCAACAAACGCGCATCTCGGGACTCGTTTCCCCTTAGACAGTACTTGGCAGGATGTATTCAAGGAAGAAGCTGCTATTCCTGACGGCGATGCTGCATTACTAAATCAAGAAGAAGAATGGCCGTCAGATGATCCTGAAGACGATGACTATAATCCAGAGAGGAAAGAAGACAGCCACGACGACATCAAAACAGAAGGAAATGATGAAAACGCATCTGATGATTCGAGTAGTTCTTCCAGCATGTGGTCTTTAAATGGAGAATGTTCTCTGTTAGATGAAGGCATCAATCTTGAATATTATTCTAACGACCACGTAGATTCTGATGAATCCGGGGAAATAGCATGCGGTCGTAGACAGCGTAGAGCTGTTGACTACAAGAAACTTTATGATGAAATGTTTGGAAAGGATGCTCTGCCATATGAACAAGCGAGTGAAGATGAAGATTGGGGTCCTGGAAAAAGACGGCGAAGAGAAAAGGAGTCTGATGCTGTTAATACTCTTATGACTCTACATGAGAGTGAAAATAAACATCCGAATAGTGAGAAGAATGATAGAATTAGAGGGAATTCTTCAGGCGTGAATGATAGAGTTGGAGGGAATTCTTCAGGCGTAAAAAGACCTTGTTTTAGGTTTTCACATGATGCAGTTGAGAAGCTTCGCCAAGTTTTTGCAGAGAATGAGCTTCCTCCAAAATCCGTGAAGGATGCCCTTTCGAAAGAATTGGGACTTGATGCTGCAAAGGTTAACAAATGGTTCAAAAATGCACGTTACATGGCACTTAAAACGAGAAAGCATCGAGAAGGAGGACAACAGCTTCAGAGTATCACATCTAAGACCTCAAAGGATTCTACATCACAACCTGTGCAGGAAGATGAGGTTTTGAACCCGAAAGTTGCGAAAATTACTGTGATTCGATCCCTGAAGAAGTGTGAGAATGTTGCTGGCAACGAAAAAACAAAAGCATCTAGCAGTCCTTTGAAGAAAAAGCGACCAGAAATACCTCCACCCTTGGGAGAAAATGGCAACAAGGATTCCATGGAGGTCAATGATGATGTAAGCTTGATGAAACTATTGAAAGAAAGGAAAAAGAGGGTGACTTTTGCATTTGAAGGAGACTCTGAGGCAGCAGAGTTGGAATTTGAAAGACTCAGCAAAGTGAAGATGAAAATAGATAGATTGAAGAAAAGATTAACTCAAGCTCAAAATTGCACATCAAAGGGTTCAGAAGAACTTCATTTGAATGAGCCATCTATTATGTATGTGCCTGTAGCTGAGTTAAGGGAAAAGGTTAAATAG 2184 0.3997 MRDTEKLNNQGSTKSSNSKEHIKLKVDSPQFKTSSTKHQKKKHRLKSKSHKVRGCTNVSARTATDSSNKAPNKDSSNKRLIIKQNLHKTDGNSTQVQPSAKIQGGKHSLNNDRKGEKDVDQEANVQKRKRRRKKKRQRHDVELDDTVRLQRRTRNILIRMKLEQNLIDAYSGEGWKGQSREKIRPEKELQRAKKQILKCKLSIRDAIRQLDSLSSVGSIEGSVIATDGSVSHEHIFCANCKMNEVSPDNDIILCDGSCNRAFHQKCLDPPLDTENIPPGDQGWFCKFCDCKIEILEATNAHLGTRFPLDSTWQDVFKEEAAIPDGDAALLNQEEEWPSDDPEDDDYNPERKEDSHDDIKTEGNDENASDDSSSSSSMWSLNGECSLLDEGINLEYYSNDHVDSDESGEIACGRRQRRAVDYKKLYDEMFGKDALPYEQASEDEDWGPGKRRRREKESDAVNTLMTLHESENKHPNSEKNDRIRGNSSGVNDRVGGNSSGVKRPCFRFSHDAVEKLRQVFAENELPPKSVKDALSKELGLDAAKVNKWFKNARYMALKTRKHREGGQQLQSITSKTSKDSTSQPVQEDEVLNPKVAKITVIRSLKKCENVAGNEKTKASSSPLKKKRPEIPPPLGENGNKDSMEVNDDVSLMKLLKERKKRVTFAFEGDSEAAELEFERLSKVKMKIDRLKKRLTQAQNCTSKGSEELHLNEPSIMYVPVAELREKVK* 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3325 727 MobiDBLite consensus disorder prediction 438 499 - -
Mal4g3325 727 CDD homeodomain 501 562 IPR001356 GO:0003677
Mal4g3325 727 MobiDBLite consensus disorder prediction 1 141 - -
Mal4g3325 727 PANTHER POLYCOMB-LIKE TRANSCRIPTION FACTOR 6 702 - -
Mal4g3325 727 MobiDBLite consensus disorder prediction 565 586 - -
Mal4g3325 727 MobiDBLite consensus disorder prediction 332 378 - -
Mal4g3325 727 PANTHER POLYCOMB PROTEIN PCL 6 702 - -
Mal4g3325 727 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 285 IPR013083 -
Mal4g3325 727 ProSiteProfiles 'Homeobox' domain profile. 498 558 IPR001356 GO:0003677
Mal4g3325 727 Coils Coil 679 699 - -
Mal4g3325 727 SUPERFAMILY Homeodomain-like 494 559 IPR009057 -
Mal4g3325 727 MobiDBLite consensus disorder prediction 438 461 - -
Mal4g3325 727 MobiDBLite consensus disorder prediction 333 347 - -
Mal4g3325 727 SMART PHD_3 236 289 IPR001965 -
Mal4g3325 727 MobiDBLite consensus disorder prediction 558 586 - -
Mal4g3325 727 SUPERFAMILY FYVE/PHD zinc finger 228 293 IPR011011 -
Mal4g3325 727 MobiDBLite consensus disorder prediction 348 366 - -
Mal4g3325 727 MobiDBLite consensus disorder prediction 35 51 - -
Mal4g3325 727 MobiDBLite consensus disorder prediction 86 106 - -
Mal4g3325 727 Pfam Homeodomain 506 553 IPR001356 GO:0003677
Mal4g3325 727 MobiDBLite consensus disorder prediction 107 126 - -
Mal4g3325 727 ProSiteProfiles Zinc finger PHD-type profile. 234 291 IPR019787 -
Mal4g3325 727 MobiDBLite consensus disorder prediction 52 79 - -
Mal4g3325 727 SMART HOX_1 500 562 IPR001356 GO:0003677
Mal4g3325 727 Pfam PHD-finger 236 291 IPR019787 -
Mal4g3325 727 MobiDBLite consensus disorder prediction 609 644 - -
Mal4g3325 727 CDD PHD_PRHA_like 236 288 IPR045876 -
Mal4g3325 727 Gene3D - 500 563 - -
Mal4g3325 727 ProSitePatterns Zinc finger PHD-type signature. 237 288 IPR019786 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3325 Mal-Chr4 97122796 97127656 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3325 141 560 Homeobox Transcription Factor Family AT4G29940 58.879 9.27e-161 481
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-PHD Mal4g3325 Homeodomain 1.2e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3325 - - gmx:100787118 974.541