Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3319 ATGGAAGCCGCCGGCGACGGTTACGGCGAAAGAGAAACTCATCCACCGTCCGACGAGGTGATTCTACAACCAGAATGGCGACGCCGAACTGCTTCCGCCGGAAGAGAGCAAAACCTTACTCTCCAACCAGAATGGAGGCGAGGGAAACCAACCGCTTCTCCTTCTCCCTCCGGCGATGAAGGTGAAAAGAAGGAAGAGGAGCAGAAAAAGGAACCAGAATGGAGAAGTTCAAAGGTGAATGCGAGTAGTGTTTGGGAACCGGAATGGAGACGATCAAGATCAGGTACTAGTGCTACTGCTACTGCATATCCATGGAATCAAAATTATGGTGTGAGGAAAGGTGTAGGATCGAGTTCGAGTGGTGTTCAGAGAGGTAGAAAGGTCGATGAATTGCGGCGAAATGCTACATCATCAGATTACGTAGCTCCCAAACTGGAAAAAGTACAAATATCGGATGATTTAGCTATATCATCTTGTGCACTTGAAAAAAAGAATAAAACTTTGCCTATTCAGAGACCTGACAGTGGTGGGACATTAGCGGTTCTTACAAGCACACTCCGTGTTAATCATTTCCCTGTTAAATTCGATCCAAAGAGTATAATATTTCATTATAATGTTGCTGTCAAACCAAAGTTTTACTCAAAAGTTGGCCAGCCTCGGAAGTTATCTAATTATGATCTTTCCATGATTAAAGAGAAAATGTTTTCTGATGATCCTGAGAGGTTTCCCTTGGACATGACTGCACATGACGGTGCAAAAAATATCTTTAGTGCAGTGCAGTTACCGGAAGATACCATTACTGTGGAGATCTCTGAAGGAGAGGATGAAAAGATCACTTCATATAGTGTTACCATAACGCTTGTTAATAAACTCAGACTTCACAAGTTAATGGACTATCTTTGTGGGCATTCATTCTCTCTGCCTAGGGATATTTTGCAAGGGATGGATGTGGTAATAAAAGAGAATCCCGCTAGGTGCACAATTCCTGTGGGACGATTCTTCTATCCCACAAATCCTCCTTTGGTAATGAAGGAACTTCGTCCTGGAATAATCGCAGTCGGGGGATTTCATCATAGTTTAAAACCTACATCTCAGGGTCTGTCCTTATGTGTAGACTACTCGGTGGTGCCTTTCCGAAAGCAAATGTCAGTCTTGGATTTCTTGCATGAGCGTATCGATAACTTTAACTTGGGTGAATTTGAAAAATTCAGGAAATATGTTGAAGAGGTGCTTATTGGATTGAAAGTTAGTGTGACGCACCGTAAATCCCAACAGAAATATATCATTGCAGGATTAACACCTACAGTTACAAGATATGTCACTTTCCCAATCGACCATACTAAGGGCTGGAAACTTGAAAAGGAAGTCAGTCTTCTTAGCTTTTTTAATGACAAATATGACAAGGACATTGTATACAAAGATATTCCTTGTTTAGATTTAGGGAAAGGCAACAAGAAGAACTATGTACCCATGGAATTTTGTGTTTTATCTGAAGGCCAAAGGTATCCCAAGGAGCGTTTAGATGGTGTTTCTGCAAAGACATTGGAAGCAATGGCACTAGCTCACCCAAGTGAGAGGCAGGGTGCTATACAGAAGATGGTACAATCGAGTGACGGCCCTTGCGGTGGTGATCTTATTCAGAACTTTGGAATGAGAGTCAGCACGACCATGACAACCATTCTAGGACGTGTAATTGGCCCCCCAGAATTGAAGTTGGGCGATCTAGATGGCAAGAATATCAAGATAACAGTGGATCTAGATAAATGTCACTGGAACCTTGCTGGAAAATCAATGGTGGAAGGCAAACCAGTTGAGCATTGGGGCATTCTTGATTTTACCAGTATTGGGCCATATAATAAAAAATTAAGGCGAAAGGAATTCGTTGAAAAACTTATTGGTAAATACAAAAAGTTGGGCATCTATATGCAGGAGCCCATTTGGTATGAAGAATCTTCAATGAAGATACTTGCGAGTCATGACTTGCTATCTGAATTACTTGAAAAAATCAACAACATTTGTAAATATAACCAAGGTCGCCGCCTACAATTTCTTCTCTGTGTGATGGCTAATAAAAGTCCAGGTTACAAATACCTCAAGTGGATTTCTGAGACCAAAGTTGGTATAGTTACACAATGTTGTTTGTCTTACAGTGCTAATCAAGGGGATGACAAATTCTATACTTATCTGGCTCTCAAAATCAATGCCAAGCTTGGTGGCAGTAATGTAGAGCTCAATAACAGGCTCCCTTACTTTGAGGGTGAAGAATATGTTATGTTTATAGGGGCTGATGTTAATCACCCTGGTTCCCAGGACAACAAGAGTCCATCAATTGTTGCTGTGGTTGCAACCGTTAACTGGCCCGCTGCAAATCGTTATGCAGCACGTGTTTGCCCACAATTCAATCGTAGTGAGAAAATATTGAACTTTGGGGAGATATGTGTTGAGCTTGTTGGTTGTTATTGTAGGATGAATGGAGTCAGGCCAGAAAAAATTGTTGTTTTTCGTGATGGGGTGAGCGAATACCAGTTTGACATGGCTCTTAATGAAGAGCTACTTGATTTGAAGAGAGCATTCCAAAGATTAAATTATTTCCCAACAATCACTCTTATTGTAGCACAAAAACGACATCAAACTCGATTTTTTCCAGATGGTTGGAGGGACGGGTCTTCCAGTGGCAATATTTTACCGGGAACGGTTGTTGACACAAAAGTTACACATCCCTTTGAGTTTGACTTTTACCTTTGTAGTTACTATGGAAGCCTAGGTACAAGCAAGCCCACTCACTATCATGTTTTATGGGATGAGCACAAGTTTACATCCGATGAATTGCAGAAACTTATTTATGAGATGTGCTTCACCTTTGCAAGGTGCACTAAACCTGTGTCTCTAGTCCCTCCTGTGTATTATGCTGACCTTGCTGCTTATAGAGGACGATTATACCACGAAGCAAAGACTGCGATGCAACCTAAGAAGTCAAGAGCATCTTCATTTTCTAAAGATTCATCATCGGTTCCACAAACAGCTCCGTTTGAACAGGGATTTTACAGATTGCATGCTGACTTGGAAAACATAATGTTCTTCATCTAA 3087 0.4137 MEAAGDGYGERETHPPSDEVILQPEWRRRTASAGREQNLTLQPEWRRGKPTASPSPSGDEGEKKEEEQKKEPEWRSSKVNASSVWEPEWRRSRSGTSATATAYPWNQNYGVRKGVGSSSSGVQRGRKVDELRRNATSSDYVAPKLEKVQISDDLAISSCALEKKNKTLPIQRPDSGGTLAVLTSTLRVNHFPVKFDPKSIIFHYNVAVKPKFYSKVGQPRKLSNYDLSMIKEKMFSDDPERFPLDMTAHDGAKNIFSAVQLPEDTITVEISEGEDEKITSYSVTITLVNKLRLHKLMDYLCGHSFSLPRDILQGMDVVIKENPARCTIPVGRFFYPTNPPLVMKELRPGIIAVGGFHHSLKPTSQGLSLCVDYSVVPFRKQMSVLDFLHERIDNFNLGEFEKFRKYVEEVLIGLKVSVTHRKSQQKYIIAGLTPTVTRYVTFPIDHTKGWKLEKEVSLLSFFNDKYDKDIVYKDIPCLDLGKGNKKNYVPMEFCVLSEGQRYPKERLDGVSAKTLEAMALAHPSERQGAIQKMVQSSDGPCGGDLIQNFGMRVSTTMTTILGRVIGPPELKLGDLDGKNIKITVDLDKCHWNLAGKSMVEGKPVEHWGILDFTSIGPYNKKLRRKEFVEKLIGKYKKLGIYMQEPIWYEESSMKILASHDLLSELLEKINNICKYNQGRRLQFLLCVMANKSPGYKYLKWISETKVGIVTQCCLSYSANQGDDKFYTYLALKINAKLGGSNVELNNRLPYFEGEEYVMFIGADVNHPGSQDNKSPSIVAVVATVNWPAANRYAARVCPQFNRSEKILNFGEICVELVGCYCRMNGVRPEKIVVFRDGVSEYQFDMALNEELLDLKRAFQRLNYFPTITLIVAQKRHQTRFFPDGWRDGSSSGNILPGTVVDTKVTHPFEFDFYLCSYYGSLGTSKPTHYHVLWDEHKFTSDELQKLIYEMCFTFARCTKPVSLVPPVYYADLAAYRGRLYHEAKTAMQPKKSRASSFSKDSSSVPQTAPFEQGFYRLHADLENIMFFI* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3319 1028 Gene3D - 753 1028 IPR036397 GO:0003676
Mal4g3319 1028 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 61 1027 - -
Mal4g3319 1028 Pfam N-terminal domain of argonaute 185 319 IPR032474 -
Mal4g3319 1028 CDD PAZ_argonaute_like 382 496 - -
Mal4g3319 1028 MobiDBLite consensus disorder prediction 58 76 - -
Mal4g3319 1028 Pfam Argonaute linker 1 domain 329 380 IPR014811 -
Mal4g3319 1028 SUPERFAMILY Ribonuclease H-like 667 982 IPR012337 -
Mal4g3319 1028 ProSiteProfiles PAZ domain profile. 382 498 IPR003100 GO:0005515
Mal4g3319 1028 CDD Piwi_ago-like 546 980 IPR045246 -
Mal4g3319 1028 Gene3D - 564 746 - -
Mal4g3319 1028 ProSiteProfiles Piwi domain profile. 683 982 IPR003165 GO:0003676
Mal4g3319 1028 Pfam PAZ domain 396 510 IPR003100 GO:0005515
Mal4g3319 1028 SMART DUF1785_2 328 381 IPR014811 -
Mal4g3319 1028 SMART Piwi_a_2 683 981 IPR003165 GO:0003676
Mal4g3319 1028 MobiDBLite consensus disorder prediction 1 32 - -
Mal4g3319 1028 SUPERFAMILY PAZ domain 377 536 IPR036085 GO:0005515
Mal4g3319 1028 MobiDBLite consensus disorder prediction 77 98 - -
Mal4g3319 1028 Pfam Piwi domain 684 978 IPR003165 GO:0003676
Mal4g3319 1028 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 61 1027 - -
Mal4g3319 1028 SMART PAZ_2_a_3 382 515 IPR003100 GO:0005515
Mal4g3319 1028 MobiDBLite consensus disorder prediction 1 98 - -
Mal4g3319 1028 Gene3D paz domain 377 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3319 Mal-Chr4 96904720 96909750 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3319 186 1027 Eukaryotic Initiation Factors Gene Family AT1G48410 33.819 2.78e-146 462
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3319 K11593 - gmx:100783571 1550.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3319 4 96904720 96909750 Mal4g3319 4 96904720 96909750 ECH