Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3313 ATGGCGAATTCAGCTGAGCCGGCGTCGTCTCTGAGCTTTACATCATCTTCGCACTTGTCAAATGGATCCATTAGTCACAACATAGGCTCTACTAATGGATCCAATCCTCGGAACCTTGAGGTTATCAGTTTGAATAAGCTAAGTTCTAATTTGGAGCAGCTTTTGATTGATTCTGATTATGATTATGGTGATGCCGACATCATTGTGGAGGGGATTCCGGTTAGAATTCATCGGTGTATTTTAGGTTCTAGGAGTAAGTTTTTTCATGAATTGTTCAAGAGAGGTAAAGATAAAGTTTCATCAAAGAATGAAGGGAAATTGAAGTATTGCTTGAGTGATTTGTTGCCTTATGGGAAAATTGGGCATGAAGCTTTTCTCATATTTCTGAGCTATGTATATACTGGTAAACTTAAGCCATCTCCAATGGAGGTGTCTACATGTGTTGATAATGTGTGTGCTCATGATGCTTGTGGACCTGCAATTAATTTTGCTGTGGAGTTGATGTATGCCTCTTCCATTTTCCAAATGCCGGAGTTGGTATCACTTTTCCAGCGACGTCTTCTTAACTTTGTAGGGAAGGCTCTTGTGGAAGATGTCATTTCAATCCTCATGGTTGCTTTCCATTGTCAATTGAATCAACTCGTCGCTCAATGTGTTGACAGGGTTGCACGATCGGACCTTGACCTGATCTCAATTGAGAAAGAGCTTCCCCATGAGCTCTCAGAAAAAGTTAAATTGCTCCGCCGCGACCTTCAACAGGATGATGAAAATGATGCTCCTGTAGTGGATGCTTTGTCTCTAAAACGAATCACTAGAATTCACAAGGCATTGGACTCGGATGACGTCGAGCTTGTTAAACTTCTTTTAAACGAGTCAGACATTACTTTAGATGAAGCCGGTGCTCTCCACTATGCAGCAGCCCACTGTGACCCTAAGGTTGTTTCTGAAGTCCTTGGATTGGGTTTGGCTAATGTCAATCTTCGGAATTCTCGAGGGTACACAGTGCTTCACATTGCTGCCATGCGTAAGGAGCCTTCAATTATAGTATCGCTTCTTACGAAAGGGGCTTGTGCATCAGATTTGACTTTCGATGGTCAGAGTGCTGTTAGTATTTGTAGGAGGTTGACAAGGCCTAAGGATTATCACACAAAAACAGAACAAGGGAAAGAAACAAATAAAGACCGGATATGCATCGATGTTCTTGAAAGAGAAATGCGAAGGAATCCTTTGGCTGGAGATCCCTCTGTGTCTTCCCACACAGTGGCTGATGATCTCCACATGAAGCTTTTGTACCTTGAGAACAGAGTGGCATTTGCAAGACTATTCTTCCCTTTGGAAGCCAAACTAGCCATGGACATAGCACGTGCGGAGACAACATCCGAGTTTGCTGGTCTTACGGCAGCAAAAGGTTCAAATGGAAACTTAAGGGAGGTTGATCTCAATGAAACTCCCATAATGCAAAACAAGAGACTTATTTCTAGGATGGAAGCCCTAATGAAAACAGTCGAGATTGGGCGACGCTACTTTCCTCATTGTTCTGAAGTGCTCGATAAGTTCATGGAGGATGACCTACCTGATTTGTTTTACCTTGAGAAGGGAACCCAAGAAGAGCAAAGAGTCAAGAGGACTCGATTCGTTGAGCTTAAAGATGATGTAAACAATGCTTTCAACAAGGACAAAGCTGAGTTTAGTCGTTCTGGGATTTCATCTTCATCATCCTCTTCATCCCTTAGAGATTCTGTATTGTACAAGGCTAGAAAAATGTGA 1767 0.4239 MANSAEPASSLSFTSSSHLSNGSISHNIGSTNGSNPRNLEVISLNKLSSNLEQLLIDSDYDYGDADIIVEGIPVRIHRCILGSRSKFFHELFKRGKDKVSSKNEGKLKYCLSDLLPYGKIGHEAFLIFLSYVYTGKLKPSPMEVSTCVDNVCAHDACGPAINFAVELMYASSIFQMPELVSLFQRRLLNFVGKALVEDVISILMVAFHCQLNQLVAQCVDRVARSDLDLISIEKELPHELSEKVKLLRRDLQQDDENDAPVVDALSLKRITRIHKALDSDDVELVKLLLNESDITLDEAGALHYAAAHCDPKVVSEVLGLGLANVNLRNSRGYTVLHIAAMRKEPSIIVSLLTKGACASDLTFDGQSAVSICRRLTRPKDYHTKTEQGKETNKDRICIDVLEREMRRNPLAGDPSVSSHTVADDLHMKLLYLENRVAFARLFFPLEAKLAMDIARAETTSEFAGLTAAKGSNGNLREVDLNETPIMQNKRLISRMEALMKTVEIGRRYFPHCSEVLDKFMEDDLPDLFYLEKGTQEEQRVKRTRFVELKDDVNNAFNKDKAEFSRSGISSSSSSSSLRDSVLYKARKM* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3313 588 Gene3D Potassium Channel Kv1.1; Chain A 33 223 IPR011333 -
Mal4g3313 588 Pfam Domain of unknown function (DUF3420) 226 274 IPR024228 -
Mal4g3313 588 ProSiteProfiles Ankyrin repeat profile. 331 356 IPR002110 GO:0005515
Mal4g3313 588 SUPERFAMILY POZ domain 59 189 IPR011333 -
Mal4g3313 588 PANTHER REGULATORY PROTEIN NPR3 10 576 - -
Mal4g3313 588 CDD BTB_POZ_NPR_plant 45 191 - -
Mal4g3313 588 Pfam BTB/POZ domain 61 181 IPR000210 GO:0005515
Mal4g3313 588 SUPERFAMILY Ankyrin repeat 262 374 IPR036770 -
Mal4g3313 588 ProSiteProfiles BTB domain profile. 63 141 IPR000210 GO:0005515
Mal4g3313 588 PANTHER REGULATORY PROTEIN NPR3 10 576 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mal4g3313 588 Gene3D - 265 405 IPR036770 -
Mal4g3313 588 Pfam NPR1/NIM1 like defence protein C terminal 373 575 IPR021094 -
Mal4g3313 588 Pfam Ankyrin repeats (many copies) 300 345 IPR002110 GO:0005515
Mal4g3313 588 SMART ANK_2a 331 363 IPR002110 GO:0005515
Mal4g3313 588 SMART ANK_2a 268 296 IPR002110 GO:0005515
Mal4g3313 588 SMART ANK_2a 297 327 IPR002110 GO:0005515
Mal4g3313 588 SMART BTB_4 63 191 IPR000210 GO:0005515
Mal4g3313 588 ProSiteProfiles Ankyrin repeat region circular profile. 331 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3313 Mal-Chr4 96861413 96865072 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal4g3313 NPR1_like_C 1.8e-95 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3313 K14508 - gmx:100217338 962.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3313 4 96861413 96865072 Mal4g3313 4 96861413 96865072 ECH