Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3312 ATGAAGTTTTTCAAATTCTTCTACTTCATTAATCTCCTCTTTACTTTCATCTTATCATCATCTTTAGCAATTGATCCTTATTCACAAGCACTCCTAAGTCTAAAATCTGAGCTTATAGATGATGATAATAGCTTGCATGACTGGGTGGTGCCCTCTGAAGGAAACTTAACTGAAAGTGGAAGTTCCTATGCATGTTCTTGGTCTGGTATCAAGTGTAACAAGGACTCAAAAGTAACTTCCATAGACCTTTCCATGAAGAAACTAGGTGGTGTACTATCAGGTAAGCAATTCAGTGTCTTCACAGAGGTTATTGATTTCAACCTAAGCTATAATTCCTTCTCTGGGAAACTTCCACCAGAAATTTTCAACCTCACAAGCTTGAAAAGCTTACACATAGGCAGAAATAATTTTTCTGGTCAATTCCCAAAAGGAATTCCTAAACTCAAAAACTTGGTTGTACTTGTTGCCTTCGACAACAGATTTTCAGGTCAATTGCCTGCTGAATTTTCAGAATTGGAAAATCTTAAGATTCTCAACCTAATTGGAAATTACTTCAGTGGAAGCATTCCATCTGAATATGGTTCTTTCAGAAGCCTTGAGTTTCTTCATCTAGATGAAAATTCTCTCACAGGAAGTATACCACCAGAATTTGGTAACCTCAAAACATTGACTTTCATGGGAATTGGCTACAATTCTTACCAGGGTTTCATTCCACCTCAACTAGGTAACATGAGTCAGCTTCAGGGTCTTGAAATAGCAGGTGCTAATCTTTCTGGTTCTATTCCAAAGGAACTTTCCAATCTCACCAATTTGCAAACACTTTTTCTGTCCATGAATCAGCTAACAGGATCAATATCAAGTGAGTTCAGCAAAATAAAACCTCTCACATTTTTAGATCTCTCTTATAATTTCCTTTCAGGGTCCATTCCTGAAAGCTTTTCAGAGCTAAAAAGCTTAAGATATTTTAGTCTTATGTCCAATGACTTGAGTGGCATTGTTCCTGAAGGCATTGCAGAACTACCATCCTTGGAATTACTTGCCCTTAGGAACAATCGCTTCTCTGGATCACTCCCAAAGAGTTCAGGAAAAAACTCCAAACTCAAGTGGGTGGATGTCTCCAAAAACAACTTCAATGGCAGCATACCACAAGCTATTTGTCAAGCTACTCAATTAGAGTATTTCAGTGTCTCTTATAATATGCAATTAGGAGGAAACATACCTTCACAAATTTGGTCTATGCCAAAACTTCAAAATTTCTCAGCATCTTCTTGTGGTATTTTAGGCAATCTTCCTTCATTTGAGTCATGCAAATCAATTTCAACAATTTATCTTGGTAGAAATAACTTATCTGGAACAATCCCAAAAAGTGTTTCGAAATGTCAAGCTCTTGTGACGTTCGACTTATATGACAATAATTTGACAGGTCAAATACCTGAGGAGCTTGCAAATATCCCTACTATTGAAATTGTAGATTTATCTATCAATAAGTTCAATGGCCTCATACCTGAAAAGTTTGGTAGTTCATCAAGTTTAAAACTTCTCAATGTGTCTTTCAACAATATCTCAGGTTCAATACCAAAAGGAAAGTCATTTGAATTAATGGACAATAGTGCATTTGTTGGAAATTCAGAGCTATGTGGAGCACCGTTAAGATCGTGTTTTAAGTCAGTGGGAATATCAGGCAGCAAAAACACTTGGAAGATTACACATATTGTGTTACTCTCTGTAGGGTTGCTAATAATCCTTCCGGTATTGGGTTTCGTAATACTTCATTTAAGAAATGGGTTTAAGAGTCAATGGAAAATGGTTTCATTTGTTGGACTTCCGCAATTTACACCAAATGATGTCTTGACAAGCTTCAATGTTGTTGCTACTGAACATACACAAGTTACAGAAGCAGTTCTTCCTACAGGTATAGCAGTTTTAGTCAAGAAGATTGAATGGGAAACAAGGAACATTAAGTTGGTGTCAGAATTTATAACGAGGCTAGGAAATGCAGCAAGGCACAAGAATTTAGTCAGGTTGTTGGGTTTTTGCTACAACCAGCAACTAGTTTACCTGTTGTATGATTACTTGCCAAATGGAAATTTGGCTGAGAAAATCGGAATGGAATGGGATTGGTCAGCTAAATTCAGAACAATAGTTGGAATTGCAAGGGGACTTTGCTTCCTTCACCATGAATGTTTCCCGGCTATACCACATGGAGACTTGAAGTCCACCAACATTGTATTTGATGAAAATATGGAACCCCATTTGGCTGAATTTGGGTTCAAACATATCATACAGTTGAGCAAAGGCTCATCTCCAACTACAGCTAAGCAGGAAATAGAATACAATGGAGCAATGAAAGAGGAACTCAGCAACGACGTCTACAATTTTGGGAAGATGATTCTAGAAATTTTAACTGGCGGAAGGTGGACAAGTGAAGCAGCCAACATTCACAGCAAATCACAGGAGATTCTTCTAAGAGAAGTTTACAATAGCAATGAAGTGACCTCTGCCAGCTCAATGCAAGAGATTAAACTGGTTCTTGAGGTTGCTATGCTTTGCACTAGAAGCAGATCATCGGATCGGCCATCCATAGAAGATGCTCTGAAGCTATTGTCAGAGTTAAAAACTTCTAAATAA 2628 0.376 MKFFKFFYFINLLFTFILSSSLAIDPYSQALLSLKSELIDDDNSLHDWVVPSEGNLTESGSSYACSWSGIKCNKDSKVTSIDLSMKKLGGVLSGKQFSVFTEVIDFNLSYNSFSGKLPPEIFNLTSLKSLHIGRNNFSGQFPKGIPKLKNLVVLVAFDNRFSGQLPAEFSELENLKILNLIGNYFSGSIPSEYGSFRSLEFLHLDENSLTGSIPPEFGNLKTLTFMGIGYNSYQGFIPPQLGNMSQLQGLEIAGANLSGSIPKELSNLTNLQTLFLSMNQLTGSISSEFSKIKPLTFLDLSYNFLSGSIPESFSELKSLRYFSLMSNDLSGIVPEGIAELPSLELLALRNNRFSGSLPKSSGKNSKLKWVDVSKNNFNGSIPQAICQATQLEYFSVSYNMQLGGNIPSQIWSMPKLQNFSASSCGILGNLPSFESCKSISTIYLGRNNLSGTIPKSVSKCQALVTFDLYDNNLTGQIPEELANIPTIEIVDLSINKFNGLIPEKFGSSSSLKLLNVSFNNISGSIPKGKSFELMDNSAFVGNSELCGAPLRSCFKSVGISGSKNTWKITHIVLLSVGLLIILPVLGFVILHLRNGFKSQWKMVSFVGLPQFTPNDVLTSFNVVATEHTQVTEAVLPTGIAVLVKKIEWETRNIKLVSEFITRLGNAARHKNLVRLLGFCYNQQLVYLLYDYLPNGNLAEKIGMEWDWSAKFRTIVGIARGLCFLHHECFPAIPHGDLKSTNIVFDENMEPHLAEFGFKHIIQLSKGSSPTTAKQEIEYNGAMKEELSNDVYNFGKMILEILTGGRWTSEAANIHSKSQEILLREVYNSNEVTSASSMQEIKLVLEVAMLCTRSRSSDRPSIEDALKLLSELKTSK* 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3312 875 SUPERFAMILY L domain-like 62 262 - -
Mal4g3312 875 Gene3D Phosphorylase Kinase; domain 1 618 689 - -
Mal4g3312 875 SMART serkin_6 611 872 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3312 875 Gene3D Transferase(Phosphotransferase) domain 1 690 875 - -
Mal4g3312 875 Pfam Protein tyrosine and serine/threonine kinase 629 865 IPR001245 GO:0004672|GO:0006468
Mal4g3312 875 Gene3D Ribonuclease Inhibitor 289 557 IPR032675 -
Mal4g3312 875 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 6 387 - -
Mal4g3312 875 Pfam Leucine rich repeat 295 353 IPR001611 GO:0005515
Mal4g3312 875 PANTHER UNNAMED PRODUCT 385 874 - -
Mal4g3312 875 SUPERFAMILY Protein kinase-like (PK-like) 629 868 IPR011009 -
Mal4g3312 875 PANTHER UNNAMED PRODUCT 6 387 - -
Mal4g3312 875 SMART LRR_typ_2 340 364 IPR003591 -
Mal4g3312 875 SMART LRR_typ_2 196 219 IPR003591 -
Mal4g3312 875 SMART LRR_typ_2 124 148 IPR003591 -
Mal4g3312 875 SMART LRR_typ_2 268 291 IPR003591 -
Mal4g3312 875 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Mal4g3312 875 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE 385 874 - -
Mal4g3312 875 SUPERFAMILY RNI-like 213 527 - -
Mal4g3312 875 Pfam Leucine rich repeat N-terminal domain 29 73 IPR013210 -
Mal4g3312 875 Gene3D Ribonuclease Inhibitor 191 288 IPR032675 -
Mal4g3312 875 Gene3D Ribonuclease Inhibitor 26 190 IPR032675 -
Mal4g3312 875 ProSiteProfiles Protein kinase domain profile. 600 871 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3312 Mal-Chr4 96840384 96843347 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3312 7 870 Receptor kinase-like Gene Family AT5G51350 45.016 0.0 720
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal4g3312 PK_Tyr_Ser-Thr 2.5e-17 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3312 - - mtr:MTR_2g029010 1419.45