Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3290 ATGGAGGATTCCGAAGGAGTCCTCAACTTCGATTTCGAGGGTCTCGACGCACCACCTTCCGCCGCCGCCACCACCATCGCCTCCGCCGCACCTTCCGGTCCAATCGTCCAGCCCGATTCCTATTTACCACCTTCCAACGCTTCCAATGGCGCCGCGGCTCCCTCGGTTGCTGAGCCTGTGACTGGTAATGTTCCTGGACGACGGAGCTTCCGGCAAACGGTTTGCCGGCACTGGCTAAGGAGTTTGTGTATGAAAGGTGAAGCGTGCGGGTTTTTGCATCAGTATGATAAAGCGAGAATGCCGGTGTGCCGGTTTTTTAGATTGTATGGAGAGTGTCGTGAGCAGGATTGTGTTTATAAACATACTAATGAAGATATCAAGGAGTGTAACATGTACAAGTTAGGATTTTGTCCTAATGGGCCTGATTGTCGATATAGGCATGCAAAATCTCCTGGACCTCCTCCTCCAATTGAAGAGGTTCTTCAAAAGATCCAACATTTATATTCTTACAATTATAACAATTCTCACAAATTTATGCAACAAAGGGGTTCTAGCTATAATCAACAAGTTGAAAAGTCTCAGTATCCTCAAGGAGTCAATTCTGCAAACCAAGGTGCGGTCGGAAAACCATTAGTTGCAGAGTCAGGAAATGTCCAGCAGCAGCAGCAACAAGTTCAACAATCTCAGCAGCAAGTCAGCCAGAACCAAGCGCAAAATCTTGCTAATGGCCAGCCCAATCAAGCCAATCGAACATCAACCCCTTTACCTCAAGGAATATCTAGGTATTTTATTGTTAAGAGTTGCAATCGTGAAAACTTGGAGTTATCTGTACAACAAGGAGTATGGGCAACTCAAAGGAGCAATGAATCAAAACTAAATGAAGCATTTGACTCTGTGGAAAATGTGATATTGGTTTTCTCAGTCAACCGTACTCGACATTTCCAGGGTTGTGCGAAGATGACATCCCGAATTGGTGGTTCTGTTGCTGGGGGAAACTGGAAATATGCTCATGGAACGGCACATTATGGACGTAATTTCTCCGTTAAGTGGTTGAAGTTATGTGAACTGTCATTCCACAAAACTCGCCATTTGAGAAATCCATACAATGAGAACTTACCGGTGAAGATAAGTAGAGATTGCCAGGAGCTGGAACCCTCTATTGGTGAGCAGTTGGCATCCTTGCTTTATACTGAGCCAGATAGCGAGCTTATGGCTATCTCAATTGCAGCTGAGTCTAAACGAGAAGAAGAGAAAGCAAAGGGAGTGAATCCAGATAATGGAGGAGAAAATCCAGATATTGTCCCATTTGAAGATAATGAAGAAGAGGAAGAGGAAGAAAGTGATGAAGAGGAAGAGAGCTTTGGTCAAGTTGTAGGGCCAGCTGTTCAAGGAAGAGGTAGGGGAAGAGGTATGATGTGGCCCCCTCACATGCATCTTGGGCGTGGAGCCAGACCGATCCATGGAATGCAAAATTTTAACCCTATGATGAGCGACGGACTATCCTACGGGCCTGCTGGACCCGATGGTTTTGGTATGCCAGATCTTTTTGGCATGGGTCCCCGAGGTTTTGGTCCATATGGTCCTAGGTTCGGTGGTGATTTTGGAGGCCCCCCAGCTAGTATGATGTTCCGAGGTCGACCCTCAAACCCTGGGATGTTTCCCGGTGGTGGATTTGGGATGATGATGAATCCTGGACGCGGTCCTTTTATGGGGGGAATGGGGGTTCCAGGTCCAAATGCACCGAGAGGTGGTAGGCCAGTCAATATGCCTCCGATGTTTCCACCACCTCCACCTCCACCACAAAATATAAACCGCATCGGCAAAAGAGATCAGAGAACAGGTGATCGGAATGATAGGTATGGTTCAGGACCAGAGCAGGGTAAGAGTCAAGACATGCTCAGTCAAAGTGGGGGTCCTGATGATGACATGCAGCATCACCAAGGATACAACAAGTCGCAGCAGGATGACAGGAATGACGATAGTGAAAGTGAAGATGAGGCACCTAGGCGGTCAAGACACGGAGAGGGAAAAAAAAGAAAAGGTGAAGCGTAG 2052 0.4722 MEDSEGVLNFDFEGLDAPPSAAATTIASAAPSGPIVQPDSYLPPSNASNGAAAPSVAEPVTGNVPGRRSFRQTVCRHWLRSLCMKGEACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKSPGPPPPIEEVLQKIQHLYSYNYNNSHKFMQQRGSSYNQQVEKSQYPQGVNSANQGAVGKPLVAESGNVQQQQQQVQQSQQQVSQNQAQNLANGQPNQANRTSTPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFDSVENVILVFSVNRTRHFQGCAKMTSRIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYTEPDSELMAISIAAESKREEEKAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGQVVGPAVQGRGRGRGMMWPPHMHLGRGARPIHGMQNFNPMMSDGLSYGPAGPDGFGMPDLFGMGPRGFGPYGPRFGGDFGGPPASMMFRGRPSNPGMFPGGGFGMMMNPGRGPFMGGMGVPGPNAPRGGRPVNMPPMFPPPPPPPQNINRIGKRDQRTGDRNDRYGSGPEQGKSQDMLSQSGGPDDDMQHHQGYNKSQQDDRNDDSESEDEAPRRSRHGEGKKRKGEA* 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3290 683 Gene3D - 65 127 - -
Mal4g3290 683 Gene3D ph1033 like domains 237 400 - -
Mal4g3290 683 MobiDBLite consensus disorder prediction 644 683 - -
Mal4g3290 683 ProSiteProfiles Zinc finger C3H1-type profile. 69 96 IPR000571 GO:0046872
Mal4g3290 683 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45 1 680 - -
Mal4g3290 683 MobiDBLite consensus disorder prediction 608 622 - -
Mal4g3290 683 MobiDBLite consensus disorder prediction 181 204 - -
Mal4g3290 683 SMART c3hfinal6 125 149 IPR000571 GO:0046872
Mal4g3290 683 SMART c3hfinal6 97 123 IPR000571 GO:0046872
Mal4g3290 683 SMART c3hfinal6 69 95 IPR000571 GO:0046872
Mal4g3290 683 MobiDBLite consensus disorder prediction 623 641 - -
Mal4g3290 683 SUPERFAMILY CCCH zinc finger 69 100 IPR036855 GO:0046872
Mal4g3290 683 MobiDBLite consensus disorder prediction 37 64 - -
Mal4g3290 683 MobiDBLite consensus disorder prediction 583 603 - -
Mal4g3290 683 MobiDBLite consensus disorder prediction 434 453 - -
Mal4g3290 683 MobiDBLite consensus disorder prediction 214 254 - -
Mal4g3290 683 MobiDBLite consensus disorder prediction 412 470 - -
Mal4g3290 683 Pfam YT521-B-like domain 260 322 IPR007275 GO:0003723
Mal4g3290 683 Pfam YT521-B-like domain 339 394 IPR007275 GO:0003723
Mal4g3290 683 Coils Coil 211 238 - -
Mal4g3290 683 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 680 IPR045168 -
Mal4g3290 683 MobiDBLite consensus disorder prediction 572 683 - -
Mal4g3290 683 ProSiteProfiles YTH domain profile. 260 395 IPR007275 GO:0003723
Mal4g3290 683 ProSiteProfiles Zinc finger C3H1-type profile. 123 150 IPR000571 GO:0046872
Mal4g3290 683 MobiDBLite consensus disorder prediction 181 254 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Mal4g3290 YTH 1.3e-44 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3290 K14404 - gmx:100802826 1045.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3290 4 96186396 96195774 Mal4g3290 4 96186396 96195774 ECH