Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3267 ATGGAAGGTGTCTTTTCCCTTCCTGTAGCCGTCAGAACTGAATTCATCCATTCTCTAATGCAATCTCTTGGATGCTCTTACATTTGTCTTTGGGCATATGATACCATATTACCAAATCGTTTGTCCTTCTTGGATGGTTTCTACAATGTCATAAGTAACCAATTACCAAGTTCTTCATTGGGGAGTCTAGCACAACAGCTTTTTAATCAATACAGAATTTTATCATTTGATGTCAATGATGACCGTGTTCCTGGACTAGCTTTTAGGAATCAACGTCCCTACATAGAGCTGCAACAATTGGAACTTCTAACACTGTCATCATCAGAAATACAAGCACAATTCTATCAGGAAGCAAGAATTAAGATAGCTGTTTTCATGGGATGCAACAAAGGAGAATTTGAGCTTGGTTTCTTAAATATGTCTCAAGTTGATATTCAAACAGCCCTTAGGAGTTTATTCCCAGAAGATTTTTCTAGTCAAACACAACAAATTGATCAAAATAATACTAATAATAATCTACCTTCATCATCTTCATCTTCAATGAGATCACTATCAACTGCAGGTAGTCCTGAATACTCATCTCTCAAATTCAACAATATTCCACCTGGAACTTCCCCATCCCATTTTCCACCTGATCCTACTCACCTTGGAGGAGTAAATATTCCACCAATGAGACCTGTTTCAAACACATTACTACCCCTTCAATTGCCTCAAATCACACCAACTCAATTATTCCCTACAACACAAATTGAGAATGATGTAATAATGAGAGCAATCCAAAATGTTCTATCTACACCCCCTTCTCATCAGCATCAATCTCAGCAAAATTATGTGGCACATCCTGAAGCTAGTGCATTTGGAAGGTATAGACAGGATAGAAGTCCTAATATAGGTTCAAATTTTAGAAGACAAAGTTTGATGAAGAGATCATTTTCATTCTTTAGAAACTTGAATTTGTTGAGAATGAGAGATCGAAATCAAGCGACGCGCCCCTCGAGTAATCAACTTCATCATATGATATCGGAGCGACGAAGACGAGAGAAGCTTAATGAGAATTTTCAAGCACTTAGAGCATTACTTCCTCAAGGAACTAAGAAAGACAAAGCTTCCATATTGATAACAGCAAAGGAGACATTGAGATCTTTGATGGCTGAAATTGACAAACTAAGCAAAAGAAATCAAGAGTTGATTTCACAACAATTACCAGCCAATAAAGAATCTACAACAAAAGAAATTATCAAATTCTCATCAAATGAAAGATTAAACGTGCGAGTTTTGCATGTAATGGAGTCAAGTTCATCACATGATGAACCAATGGTAGTGGATTTGCAAGTGAACGTGATGGGACAAATTTCTCAAGTTGATGTATTGATTCGATTATTGGAATTCTTAAATCAAGATCAACATGTCAACTTGGTTTCAATGGATGCAACAAATACAAATAATGCACAAGGGAATCATAATTCACTTCATCAAATAACCTTCAGGCTAAGGATTACTCAGACAAGTGAATGGGACGAGGAAGCCTTCCAGGAAGCAGTGAGAAGAGTGGTTGCTGACTTGATACATTACCAAGTGGACCAAAATATGTGA 1593 0.3691 MEGVFSLPVAVRTEFIHSLMQSLGCSYICLWAYDTILPNRLSFLDGFYNVISNQLPSSSLGSLAQQLFNQYRILSFDVNDDRVPGLAFRNQRPYIELQQLELLTLSSSEIQAQFYQEARIKIAVFMGCNKGEFELGFLNMSQVDIQTALRSLFPEDFSSQTQQIDQNNTNNNLPSSSSSSMRSLSTAGSPEYSSLKFNNIPPGTSPSHFPPDPTHLGGVNIPPMRPVSNTLLPLQLPQITPTQLFPTTQIENDVIMRAIQNVLSTPPSHQHQSQQNYVAHPEASAFGRYRQDRSPNIGSNFRRQSLMKRSFSFFRNLNLLRMRDRNQATRPSSNQLHHMISERRRREKLNENFQALRALLPQGTKKDKASILITAKETLRSLMAEIDKLSKRNQELISQQLPANKESTTKEIIKFSSNERLNVRVLHVMESSSSHDEPMVVDLQVNVMGQISQVDVLIRLLEFLNQDQHVNLVSMDATNTNNAQGNHNSLHQITFRLRITQTSEWDEEAFQEAVRRVVADLIHYQVDQNM* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3267 530 Coils Coil 372 399 - -
Mal4g3267 530 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED 1 521 - -
Mal4g3267 530 Pfam Helix-loop-helix DNA-binding domain 337 382 IPR011598 GO:0046983
Mal4g3267 530 MobiDBLite consensus disorder prediction 158 217 - -
Mal4g3267 530 Gene3D - 332 406 IPR036638 GO:0046983
Mal4g3267 530 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 333 382 IPR011598 GO:0046983
Mal4g3267 530 Coils Coil 339 359 - -
Mal4g3267 530 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 331 402 IPR036638 GO:0046983
Mal4g3267 530 SMART finulus 339 388 IPR011598 GO:0046983
Mal4g3267 530 MobiDBLite consensus disorder prediction 158 203 - -
Mal4g3267 530 CDD bHLH_AtbHLH_like 338 390 IPR045239 -
Mal4g3267 530 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 521 IPR044658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3267 Mal-Chr4 95342013 95347093 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3267 11 523 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G56960 41.144 5.21e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal4g3267 HLH 1.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3267 - - gmx:100807098 594.349