Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3258 ATGGAATACTTGAGAAGTGGATTCTCAGAATATTCAAACGAAATCAGTAACAACAGCAGTGAATTATGCTGCATAGCACCTAACAATATAATCAACAACACAGCATCCAATTCAACTACACAACTGAACCGTCTCTCAGACAATCTAGCTTCAATCCTGGATGATGCAGAGTTTGACTTCTTTGCAGACTCAAAGATCATCACCAGAGATAGTCGAGAAGTTCCAGTGCACCGTTGCATTCTGGCAGCGAGGAGTAGTTTCTTTAAGGCTGTATTCGGAGGAAAGAAAGAGACATCGAGGATTGAATTGAAGGATTTTGCTTTACCTTATAATTGGCGCATTCCTGATGGACATCTACTAGATATTCTTGACAAGATTGCAATAGATGACATGTTGGTGATTCTTTCTGTAGCAAATATATGTGGTAAAACATGTGATAAACTACTAGTAGGATGTAGAGAGATAATAGTTAAATCAAATGTTGATATCACCACTCTTGAAAAAGCACTTCCTCAACCTATAGTGAAACAAATAATGGACAAAAGAAAACAACTAGGCTTGAAAATGTCTGAAACCTTTAATCCTCTACACAAACATGTCAACAGAATACATAGAGCTCTAGATTTAGATGATGTAGAATTAGTAAGGTTGCTTTTGAAAGAAGGACACACTACTCTAGATGAGGCTCATGCACTTCACTATGCTGTTGCATACTGTGATGTGAAGACAACTTCTGAGCTTCTTGATCTTGGACTTGCTGATGTGAATCACAAAAACGATAGGGGATATAGTGTGCTTCATGTCGCTGCGAAGAGAAAAGAACCGAAGATTATTGTATCTTTGTTAACGAAGGGAGCTCAGCCTTCTGAACTCACTTTGGATGGTAGAAAAGCTCTTCAGATTTCGAAGCGTTGCACAAAAGCCGTGAATTACTATAATTCTATGGAGGAAGGAAAGGTTTCATCGAATGATCGATTGTGTATAGAGATATTGGAACAAGCTGAGAGAAGAGAGCCTTTACTTGGGGAGGCGTCTCTTTCTCTTGCTATGGCAGGGGACGATTTGCGTATGAAATTGTTGTACGTTGGACTAGCAAAACTTTTGTTTCCAATGGAAGCAAAGGTTGTGATGGATATTACTCCAATTGATGGCACATCTGAATTTACTCCAAATTTGGGTGGTTACCAGAGGACAACTATGGACTTAAATGAGGCACCTTTTAAAATAAAAGAGGAGCATCTAATTAGGATGAAGGCACTATCTAGAGCAGTGGAGTTGGGGAAACGGTTCTTCCCTCGTTCCTCAGAAGTGTTGAACAATATCATGGATGCTGACGACCTATCACAACTTGCATGTATGGGTAATGACAGTCCCGAAGATCGACAAGTGAAGCGCAGACGATACATGGAGCTCCAAGAAGTTCTTAATAAGGTCTTCCATGAGGACAAAGAGGAGTTTGATAAATCTGCCATGTCTTCATCATCCTCATCCACATCAATAGGAATGGCAATGCCGAATAATAATAAGATAGCAATGAAGAATTTAGTTAAAGATAATAATAATGTATTCTAA 1572 0.3906 MEYLRSGFSEYSNEISNNSSELCCIAPNNIINNTASNSTTQLNRLSDNLASILDDAEFDFFADSKIITRDSREVPVHRCILAARSSFFKAVFGGKKETSRIELKDFALPYNWRIPDGHLLDILDKIAIDDMLVILSVANICGKTCDKLLVGCREIIVKSNVDITTLEKALPQPIVKQIMDKRKQLGLKMSETFNPLHKHVNRIHRALDLDDVELVRLLLKEGHTTLDEAHALHYAVAYCDVKTTSELLDLGLADVNHKNDRGYSVLHVAAKRKEPKIIVSLLTKGAQPSELTLDGRKALQISKRCTKAVNYYNSMEEGKVSSNDRLCIEILEQAERREPLLGEASLSLAMAGDDLRMKLLYVGLAKLLFPMEAKVVMDITPIDGTSEFTPNLGGYQRTTMDLNEAPFKIKEEHLIRMKALSRAVELGKRFFPRSSEVLNNIMDADDLSQLACMGNDSPEDRQVKRRRYMELQEVLNKVFHEDKEEFDKSAMSSSSSSTSIGMAMPNNNKIAMKNLVKDNNNVF* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3258 523 ProSiteProfiles Ankyrin repeat region circular profile. 261 287 - -
Mal4g3258 523 PANTHER REGULATORY PROTEIN NPR3 3 107 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mal4g3258 523 Pfam BTB/POZ domain 60 106 IPR000210 GO:0005515
Mal4g3258 523 Pfam NPR1/NIM1 like defence protein C terminal 303 498 IPR021094 -
Mal4g3258 523 Pfam Ankyrin repeats (3 copies) 204 288 IPR002110 GO:0005515
Mal4g3258 523 SUPERFAMILY Ankyrin repeat 199 304 IPR036770 -
Mal4g3258 523 Gene3D Potassium Channel Kv1.1; Chain A 31 110 IPR011333 -
Mal4g3258 523 ProSiteProfiles BTB domain profile. 62 92 IPR000210 GO:0005515
Mal4g3258 523 ProSiteProfiles Ankyrin repeat profile. 261 293 IPR002110 GO:0005515
Mal4g3258 523 SMART ANK_2a 227 257 IPR002110 GO:0005515
Mal4g3258 523 SMART ANK_2a 198 226 IPR002110 GO:0005515
Mal4g3258 523 SMART ANK_2a 261 290 IPR002110 GO:0005515
Mal4g3258 523 SUPERFAMILY POZ domain 56 107 IPR011333 -
Mal4g3258 523 Gene3D - 165 337 IPR036770 -
Mal4g3258 523 PANTHER REGULATORY PROTEIN NPR2 117 509 - -
Mal4g3258 523 PANTHER REGULATORY PROTEIN NPR2 3 107 - -
Mal4g3258 523 PANTHER REGULATORY PROTEIN NPR3 117 509 IPR044292 GO:0009862|GO:2000022|GO:2000031
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3258 Mal-Chr4 94955962 94959771 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mal4g3258 NPR1_like_C 2.1e-76 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3258 K14508 - gmx:100800032 603.594