Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3247 ATGGATCAAAAGAAACAAGAGGAACGAAGAAATGATGAGATCCAAAATCAATCAAACCAGATAATGCCATTATCTCGACCAGTATTTCACAATGCAGGTGCTTCTGCCTTTTCATCCTACCCGAACAGAGTTCAACTCCGAGAATTCTCCCACAACTACACTCGCAGCCAACAAAAACAACAAGAACTGCAGAAAAGACTTGATACCTTTTGGGCCAATCAAAATGAAGAAATTAAGGAGACCATTGATTTCAAAACTAATGGCTTGCCTTTAGCCAGGATTAGGAAGATCATGAAAGCAGAAGAAGGAGTGAGTATGATATCAGCTGATGCACCTATTCTGTTAGCTAAGGCATGTGAAATGTTTATGATGGAACTTACAACAAGGTCTTGGGCTAATACAGAGGTGAACAAAAGAAAAACACTTCAAAAGAGTGACATTGCATCTGCAGTCACAAGTAATGATGTGTTTGATTTCCTAGTTGATGTTGTCCCCAGGGAAAAAACAATGGAGCATGACATATTTATGGGTGTACCAAGAAGAGAAAGTGTTTCAATAGGGAATGTTCCTTATCATGTGCCTATGCCATTTCATGTGCCACCTCAATATGTTGCAGGTCCATCATATGGTCCTCCACAAATGCTTATGGGAAGACATCTTCTCAACCAACCTCATTTCAATGGGCAGCCACCACACCTTGTTGCAAATCAAATGTTTCCAATCTCAAAACAACAAAATGACCATTCTGATGATTTGCCAAATTCTGAAGATTAA 774 0.3941 MDQKKQEERRNDEIQNQSNQIMPLSRPVFHNAGASAFSSYPNRVQLREFSHNYTRSQQKQQELQKRLDTFWANQNEEIKETIDFKTNGLPLARIRKIMKAEEGVSMISADAPILLAKACEMFMMELTTRSWANTEVNKRKTLQKSDIASAVTSNDVFDFLVDVVPREKTMEHDIFMGVPRRESVSIGNVPYHVPMPFHVPPQYVAGPSYGPPQMLMGRHLLNQPHFNGQPPHLVANQMFPISKQQNDHSDDLPNSED* 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3247 257 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-9 19 250 - -
Mal4g3247 257 SUPERFAMILY Histone-fold 54 160 IPR009072 GO:0046982
Mal4g3247 257 MobiDBLite consensus disorder prediction 1 22 - -
Mal4g3247 257 Coils Coil 46 66 - -
Mal4g3247 257 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 89 151 IPR003958 -
Mal4g3247 257 Gene3D Histone, subunit A 50 166 IPR009072 GO:0046982
Mal4g3247 257 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 19 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3247 Mal-Chr4 94458487 94459260 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3247 69 224 CCAAT-HAP5 Transcription Factor Family AT1G54830 51.875 9.86e-49 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mal4g3247 CBFD_NFYB_HMF 6.9e-18 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3247 K08066 - nnu:104612503 199.904