Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3220 ATGGAGTGGACTAGAGGCAGAATCATCGGCCGGGGCTCGACAGCCACCGTCTACATCGCTGAGCGTTGTCATTCTGGAGGTTTTTTTGCGGTGAAATCTACAGAGCTTCACCGCTCAGAATTCTTGAAGAAAGAACAACAAATTCTCTCGAAGTTAAAGTGTCCACAAATTGTGAATTATGAAGGCTGTGAAGTCACGTTTGAGAGTAATGTTCACTTGTTCAACTTGTTCATGGAGTATGCACCAAAAGGGACTGTTTCTGATGCAGTTCGTAATGGAAATGGAATTGAAGAAGCTTTGTGTGGGTTCTACGCACGTGAAATTCTACTAGGACTTAACTACATTCATTCAAATGGGATAGTGCATTGTGATTTGAAGGGACAGAACGTGTTGTTGACGGAACAAGGAGTGAAAATTGCGGATTTTGGATGTGCTAGGAGGGTGGAAGAGGAGTTGGTGATTTCTGGTACACCGGCTTTCATGGCGCCGGAGGTGGCACGTGGGGAGGAGCAGGGATTTGCTGCTGATGTATGGGCTTTGGGATGTACTTTGTTGGAGATGATCACTGGGAAAATGCCGTGGCAGGGTTTTTCTGACCCTGCCACGGTTTTGTATCAGATTGGATTCTCTAGCCATGTGCCAGAGATTCCTGATTATGTGTCGGAACAGGGGAAGGATTTTTTGAGAAAATGTTTCAAAAGAGATCCAAATGAGAGGTGGTCGGTGATTGAGCTTCTTGGACATGAATTTGTTGGGAAGTTTAAGGATTCGGTGTTTGATTCAGAAACTCCAACGACGGTGTTGGAAGGAGGCTTTTGGGATTGGGATTCTTTGGAAACAACTCAGGAGGTAGGTCCCACTTTTGATTGTTGTTGTTCCTCGGATTCTTCGAATCCAAGAGACAGAATTCAAAGGTTGTGTTCTGATGAGGCTGTTTGGGAATTTGATGATGAAGAATGGGTTACTGTGAGAAGCAATGGTGAAGATTTGGATACATTGTCATTTGAAGAAATGGAAGATTATGAATCAGATATTGAATCAGACATTGTTTGTGAAGTTAGTAATCATGAGATTAGTTTGGTAATTTTTTATGAACCAAAAATTGTAGTTGAATTGAGTAGATGGATTGACATTTTTTATTATTTGTGTTTTAGAAGCTGCAATTGTGGCTTTTTTGTTAGTGATTTTTCATCAGTTTGTCAATGTAGAATGATTGTTCTCCTTGTAAAATTTGATTCTCAGAATAATAAAGAAATTTTTATCATCCCCTGCTTTCTGCTTTTTGATTTCTCTTTAATTTCTCATTGGATAGATAAATTGAACATTTTACAATTTAAAATTTTAAAATATTCATGTCATGGGATAATTTATGTGCTTCTTTAG 1383 0.3955 MEWTRGRIIGRGSTATVYIAERCHSGGFFAVKSTELHRSEFLKKEQQILSKLKCPQIVNYEGCEVTFESNVHLFNLFMEYAPKGTVSDAVRNGNGIEEALCGFYAREILLGLNYIHSNGIVHCDLKGQNVLLTEQGVKIADFGCARRVEEELVISGTPAFMAPEVARGEEQGFAADVWALGCTLLEMITGKMPWQGFSDPATVLYQIGFSSHVPEIPDYVSEQGKDFLRKCFKRDPNERWSVIELLGHEFVGKFKDSVFDSETPTTVLEGGFWDWDSLETTQEVGPTFDCCCSSDSSNPRDRIQRLCSDEAVWEFDDEEWVTVRSNGEDLDTLSFEEMEDYESDIESDIVCEVSNHEISLVIFYEPKIVVELSRWIDIFYYLCFRSCNCGFFVSDFSSVCQCRMIVLLVKFDSQNNKEIFIIPCFLLFDFSLISHWIDKLNILQFKILKYSCHGIIYVLL* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3220 460 PANTHER MAP KINASE KINASE KINASE 1 345 - -
Mal4g3220 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Mal4g3220 460 SMART serkin_6 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3220 460 ProSiteProfiles Protein kinase domain profile. 3 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3220 460 CDD STKc_MAPKKK 2 251 - -
Mal4g3220 460 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 345 - -
Mal4g3220 460 Pfam Protein kinase domain 4 251 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3220 460 Gene3D Transferase(Phosphotransferase) domain 1 2 273 - -
Mal4g3220 460 SUPERFAMILY Protein kinase-like (PK-like) 3 262 IPR011009 -
Mal4g3220 460 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3220 Mal-Chr4 94119587 94120969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3220 1 273 MAP Kinase Kinase Kinase AT2G32510 52.962 1.90e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mal4g3220 Pkinase 6.3e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3220 K20716 - gmx:100802174 459.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3220 4 94119587 94120969 Mal4g3220 4 94119587 94120969 ECH