Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3202 ATGAAGATTGTATTTGATCCGGAAAAAATGAAGCTTAGAATTATAATACATGAAAACTCAAATCAAAGCACTGAGTTTTTAAGAAACTCAAAACCAGGTGGAGGTAAAAGAAAAGTTGCAGCTTCTGTAGCAGAATCGTCACAACAAAATATATCAAAAAAACAGAAAACAAAACTTGATAACAATAATATTTTTGAAGATGAAGAAGATGAGGAAATTATATTTGTTTCAAAGACAACGTCAAGAAGCAAAGCCATAAAATTGGATAATATAAAGGACACTAAACAAAATATCAAAATATGTCATCAATGCTTGAGAAATGATAGGACAAAATTTGTACCTTGTACAAAATGTCAACAAATTTACTGTCTAAGGTGTATTAAACTATGGTACCCCTATATGTCAATTGAAGATATTGCCGAGAGGTGCCCCTTTTGTCATAATAATTGCAATTGCAATGTTTGCTTGTGTTCAAGAGGAAGAATTGAGACATCTAACTGGAACATCACAGATTGCGAAAAAGTTTATCATCACCGATATATGATTAGCTTACTACTTCCATTTCTTCGACAAATTTTGGAAGAACAACGTCAAGAACAATATATTGAAGCTAAAATACAAGGAAAATCATGTTATGAGATTGTGATACCACAAGCTCCTTGTCATGACATGGAGCGTGTCTCTTGTGATCATTGCGCTACTTCAATTATTGACCTTCATAGAAGTTGTCCTGAATGTTCCTTTAAAATATGTCTTAGTTGCTGCAAAGAAATACGCAATGGAAGTATCACACCACGCTTTGAAACAAAGTTTCAATACATAAATAGAGGTGATGACTACATGCATGGTGGTGATCCTCTGTCAATAACTTGTGATACAAGTAATTCTGAGGGTCATGATGAGATATTTACCAAATGGAAAGCTAAAAGTGATGGAAGTGTTGAATGTGCTCCAAAAGAACTAGGTGGTTGTGGTGGCTGTGTGATGGAGCTGAAATGCATGCTACCAAGTGGGAGAATATCTCAATTGGTAACAAAAGCTAGCGATATCATGAAACATTTTTGCAATGCTGAAGAACAAATGAATGATGAGAATGAAGCAATGTCAAGTTGCAAGAATGACAATGACATATATTGTCCAGTATCAAGTGAGCTTTTAAAAGAAGGGATATTTGAATTCCAAAAGCATTGGAGGAACCGTGAACCCATCATAGTACGTGATGTTCTCAAACAAGGGACGGGATTGAGTTGGGAGCCAATGGTTACATGGAGAGCATTGCGTGTAAATTCAGCTTCAGGTGTCAGCTCAAACGGTAACTCAAAAGTACAGGCTATTGACTGCTTGTCTAGTTGTGAGGTAGTAATTAAAACTCGCGAGTTCTTCAAAGGTTATAAGGAGGGAAGAAGATATAGAAATTTCTGGCCAGAGATGCTCAAGCTAAAAGATTGGCCCCCTTTTGACAAGTTTGAAGATCTTTTGCCTCGCCATTACGACGAGTTTATCCGTTGCTTGCCATTTCAAGAGTATAGTGATCCTCGATCCGGAATCCTCAACCTTGCTGCAAAGTTGCCACCACATGTCATAAAGCCTGACTTAGGTCCAAAAACTTACATTGCTTATGGAATCAAAGAAGAGCTTGGCAGAGGAGATTCTGTTACAAAACTTCATTGTGATATGGCAGACGCGGTGAATATTTTGACTCATATACATGAGGTGAAATTAACTGATGAACAACTTTCTGCTATTAGAAAAATAAAAAGAGCACATAAGGCTCAAGATAGGAAAGAGGGTCGTGCGCAAGATAATAGAGTCCCTTTTGAGATCAATCGAAATTTCTTTCCGAATGAAGTGCCATCTATCACAAAAGAAACATCGGAAACAGTTGGTGCTCTTTGGGACATATTTAGAAGAGAAGATACTGCAAAGTTAGAAGCATATCTTAGAAAATATTCCAAGGAATTTAGGCATACTTTTTGTTCTCCAGTAAAACAGGTTGACCATCCTATTCATGACCAATGTTTTTATTTGACTTTGGAGCATAAGAAGAAGTTAAAGGAAGAGTTTGGTGTAGAACCTTGGACTTTTGAGCAGAAACTTGGTGAAGCAATATTTATACCTGCTGGATGCCCTCACCAAGTCAGAAATCTCAAGTCGTGCGCAAAAGTTGCTGCAGACTTTGTGTCACCAGAAAATGTGCATTACTGCATGCTTTTAACTAATGAGTTTCGTCGTCTTCCTAAGGGTCACAAGGCAAGAGAAGACAAACTTGAGTTAAAAAAGATGATAGTCTATGCTGTTGATCAAGCTGTTCAAGAATTGGAAGCTTTCAAAAAAGACTCTTCACTGGCTTGA 2352 0.3703 MKIVFDPEKMKLRIIIHENSNQSTEFLRNSKPGGGKRKVAASVAESSQQNISKKQKTKLDNNNIFEDEEDEEIIFVSKTTSRSKAIKLDNIKDTKQNIKICHQCLRNDRTKFVPCTKCQQIYCLRCIKLWYPYMSIEDIAERCPFCHNNCNCNVCLCSRGRIETSNWNITDCEKVYHHRYMISLLLPFLRQILEEQRQEQYIEAKIQGKSCYEIVIPQAPCHDMERVSCDHCATSIIDLHRSCPECSFKICLSCCKEIRNGSITPRFETKFQYINRGDDYMHGGDPLSITCDTSNSEGHDEIFTKWKAKSDGSVECAPKELGGCGGCVMELKCMLPSGRISQLVTKASDIMKHFCNAEEQMNDENEAMSSCKNDNDIYCPVSSELLKEGIFEFQKHWRNREPIIVRDVLKQGTGLSWEPMVTWRALRVNSASGVSSNGNSKVQAIDCLSSCEVVIKTREFFKGYKEGRRYRNFWPEMLKLKDWPPFDKFEDLLPRHYDEFIRCLPFQEYSDPRSGILNLAAKLPPHVIKPDLGPKTYIAYGIKEELGRGDSVTKLHCDMADAVNILTHIHEVKLTDEQLSAIRKIKRAHKAQDRKEGRAQDNRVPFEINRNFFPNEVPSITKETSETVGALWDIFRREDTAKLEAYLRKYSKEFRHTFCSPVKQVDHPIHDQCFYLTLEHKKKLKEEFGVEPWTFEQKLGEAIFIPAGCPHQVRNLKSCAKVAADFVSPENVHYCMLLTNEFRRLPKGHKAREDKLELKKMIVYAVDQAVQELEAFKKDSSLA* 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3202 783 ProSiteProfiles JmjC domain profile. 512 743 IPR003347 -
Mal4g3202 783 ProSiteProfiles Zinc finger RING-type profile. 101 147 IPR001841 -
Mal4g3202 783 Gene3D Cupin 373 752 - -
Mal4g3202 783 Pfam JmjC domain, hydroxylase 623 726 IPR003347 -
Mal4g3202 783 PANTHER JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROTEIN 42 777 IPR045109 GO:0032454|GO:0033169
Mal4g3202 783 CDD cupin_RmlC-like 667 715 - -
Mal4g3202 783 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJC) DOMAIN PROTEIN 42 777 - -
Mal4g3202 783 SUPERFAMILY Clavaminate synthase-like 392 777 - -
Mal4g3202 783 SMART cupin_9 493 743 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3202 Mal-Chr4 93863228 93867124 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal4g3202 JmjC 2.7e-13 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3202 K15601 K21989 gmx:100801772 990.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3202 4 93863228 93867124 Mal4g3202 4 93863228 93867124 ECH