Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3186 ATGGAGCATCTACTTAGATCACTTCGACCATCGCGTTTTCGTTTCCGTTCACTCTCTTCTTCTCAAACCCTAACTTCTCATTTCTCTCGCCGCCTTCACTCCTCTCTCTCTCCAAAAGTAGAATCTGCGTCTGCATCTGCTCGATCATCTTCATCGGTTTCCGATGTTTCCACGAGTTCCAGAGTTTTGCGAGGGGATTTCGGACAGTATTCGATGCTACCTGCTGCTGTTTTGGCTGGTTTATTTGGAATTGGAATGGTGGAAACTGCTTATGCGGAAGAACAAGCGAATGAAGATGTGCAAGAAATTGCGAAGAAAGAACGCCAGAGAATTCAGGACTTGCTTGCAACTAAGGGAATTCGTCAAGGTTCTGTTCCTCGCTTCAATGTCGCTGTTAAAGGCCAAAAGGTGAGTATAAAGTTTCAAGTTCCTCCGGGTTGTGAAGTTTCACAAGTTATTGCAAATCTTACTGCACATCTTGGACTGAAATCTGAAGGCCACGGCGGTGGTTCAGATATGATTTTGCGTGCATGGGACAGCACGGTTGCATGGCAACTTACCCTGACTCATCCATCAAAGCAAAAACATATTCAACAGAATGATCCGTCTTTGACAGATACAAATGCACATGATAGAGATCTATGTATACTTATATTTCATTCCCTCATTGGCTCAGATAAAGTTGAAATTGAATTTATGAAGCAGGGGAACTTGAGCCCCGAAGAGCTTGATGCTTTCATATCTGTTTTACAATTAGCTGGCAACAAGTTGGTTGAAAGAAATCCTCAGGAAAGAAAGCCAAAGGAAGAGACCGAACAGCCGCAATCTGTAGAAAAATCTATTTCGAGTCTTGAGGCCATGGGAGTAAAAGTATATGGACTCAATGAACCCATAGGTATATCAAACACTGAGATATCATGGGACATCATCGCTGGGTACGAGCATCAAAAGCGGGTAATAGAAGATACAGTACTATTAGCTTTGCGCAGTCCTGAAGTATATGATGATATTGCTCGGGGGACTCGGCATAAGTTTGAGTCTAACAGACCTCGAGCCGTGCTGTTTGAAGGTCCACCAGGTACAGGGAAAACCTCTTGTGCCCGTGTTATTGCTAACCAAGCGGGTGTCCCTTTGCTTTATGTGCCACTTGAGGTAGTGATGTCTGAATTCTATGGTAAAAGTGAACGCCTTCTAGGGAAAGTGTTTTCACTAGCAAACAATCTTCCCAATGGTGCTATTATATTTTTGGATGAGATTGATTCTCTTGCTGCTGCTCGTGATAATGATATGCATGAAGCTACACGTAGAATGTTGTCAGTATTATTGCGACAGATAGATGGCTTTGAGCAGGATAAGAAAGTGGTTGTCATTGCTGCCACAAATAGAAAGGAAGACCTTGATCCTGCATTAATTAGTCGGTTTGATACTATGATCGCTTTTGGTTTACCTGATCATCAAACTCGTCAGGAAATAGCATCTAAATATGCAAAGCACATGTCTAAAGCTGAACTTAATGAACTTGCAAGAGTTACAGAAGATATGGCTGGAAGAGATATTAGAGATGTTTGTCTGCAAGCGGAACGATCCTGGGCATCGAAGATTATTCGGGGACAAGTATCTAAAGACGACGAACAAGCAAACCTTCCACCTTTGCAAGAATATGTAGCATGTGCAACACATCGACGGGAAGCGCTGCTTAGTGCTGCTGCAAACAGGAAGATTCGAAGTTCTTCCCACCAAAGGATAATAAATGAATAA 1758 0.4272 MEHLLRSLRPSRFRFRSLSSSQTLTSHFSRRLHSSLSPKVESASASARSSSSVSDVSTSSRVLRGDFGQYSMLPAAVLAGLFGIGMVETAYAEEQANEDVQEIAKKERQRIQDLLATKGIRQGSVPRFNVAVKGQKVSIKFQVPPGCEVSQVIANLTAHLGLKSEGHGGGSDMILRAWDSTVAWQLTLTHPSKQKHIQQNDPSLTDTNAHDRDLCILIFHSLIGSDKVEIEFMKQGNLSPEELDAFISVLQLAGNKLVERNPQERKPKEETEQPQSVEKSISSLEAMGVKVYGLNEPIGISNTEISWDIIAGYEHQKRVIEDTVLLALRSPEVYDDIARGTRHKFESNRPRAVLFEGPPGTGKTSCARVIANQAGVPLLYVPLEVVMSEFYGKSERLLGKVFSLANNLPNGAIIFLDEIDSLAAARDNDMHEATRRMLSVLLRQIDGFEQDKKVVVIAATNRKEDLDPALISRFDTMIAFGLPDHQTRQEIASKYAKHMSKAELNELARVTEDMAGRDIRDVCLQAERSWASKIIRGQVSKDDEQANLPPLQEYVACATHRREALLSAAANRKIRSSSHQRIINE* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3186 585 Gene3D - 302 482 IPR027417 -
Mal4g3186 585 ProSitePatterns AAA-protein family signature. 454 473 IPR003960 GO:0005524|GO:0016887
Mal4g3186 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 305 528 IPR027417 -
Mal4g3186 585 Pfam ATPase family associated with various cellular activities (AAA) 353 481 IPR003959 GO:0005524|GO:0016887
Mal4g3186 585 SMART AAA_5 349 484 IPR003593 -
Mal4g3186 585 MobiDBLite consensus disorder prediction 258 279 - -
Mal4g3186 585 MobiDBLite consensus disorder prediction 259 275 - -
Mal4g3186 585 Gene3D - 483 550 - -
Mal4g3186 585 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 57 568 - -
Mal4g3186 585 CDD AAA 346 482 - -
Mal4g3186 585 Coils Coil 97 117 - -
Mal4g3186 585 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 57 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3186 Mal-Chr4 93546698 93556751 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3186 349 549 Calmodulin-binding Proteins AT3G56690 36.058 9.70e-30 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3186 - - mtr:MTR_2g024440 981.474