Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3150 ATGTCAAGAATCCCCAAAACCATCGCCGGCGGTTGTTTCAACCAACAGAGCATTAATGGCGCCACCGCCGACCACCACAATAACCACCTCCCGGAGCTCAAACTCAACGACACCAAAACGTCGTCGTCACGGTTGCAATTCTTCGTTCGCATGATGTGGAAGTGTGACACCATAGTGATTCGCGCTTCAAAAGAAGACACAGTGAAATCACTTCTTGAAATAATTTCATCTAAAACTAAAATTCCGATTGAACATCAACGATTAATTTACAGAGGAAAACAGCTTCAGAGAGAACAGAGTCTTGGCGAATGCGGCATCGAAAACGATGCAAATCTTCAATTGATTGGTCACTTGAAGAGTATAGGGCGTTCTTTTGTGTGGAATGCCACAGATGACATTGTTTCGTTGATTCTCAAACTCTGTAGAGGTGGATCGGTGATTGGTGCTTCCATAATTATTCATAATCACTTTTTAGAGTATGTGGATAATCCTGAATATTTGTATGTTTTCAAGTTTATGAAAATTCCTTCTCTGTTGGTAGCTCTTTATATATCCCCTTACGCAAGTAATGCTGGCATTGCTGATTTGTCTGTTAAGAATTTCGTGAAATATTGTTTAGATGTGAAGGGCAAAACATTGCAGGATTGTTACCTTGAAGTGTTATTGGAGTTTTGTGAATTGCTTAGAGGGATAGGGTGTAAGTGTGACCATCCTATGTATGTTTGTTGCCGGGATGGTTTTGCAACTTTGTTGACGCGACTTGGTGGTGTTCCCTGTGAGAATCCTAAACGGAAGGTTTTGCTTCGGGGTGGTTTTGATTTTGTTCATGAGCTTGTAGATGGGTTGTTGCGGTATTTGGATTTGAGTATGAAATGTCTCACCGGCGAGGGGCTTTCGTGCAATGTTGTTAAGGATTTTGTTAAACTCTCTGGCCCTTTGAGAATGGGATTCTCCGAGCAGCAAGCAGCATTGGATGAATATTTGAATTGTGGAATTTGCTATGAGGAGGATCCCTTGTTTGAAGGAGTACTTGATCGCCTTCATAATGTATTTATTCAGTTATTGAGCAAAATGGACGAGTGCCTTCAAGTCATGGAAGATTGCTTGGTTAACAAGGTACAAGGAAAAGGGGTTGGGGATGTTATCCATAATAGGTGGTCTAGTTATCTTATTATTCTTAAGGAATTGTATCACATCTCCAAGTTCTATAGCGGTGCACAAGAAAAGTTTTGGGGACTTTTCTTGCGCCGAAAAAATGTGCTGCCTCATATGATTGTTCGGTACGTGAAGAAAACCGATGATCATCGGTGGCTTCTTGAGAACAGAACTGTGACCGATTTTGAATCCAGGAGGCATTTGGCGACGATGCTATTCCCTGACTTACAAGATGAAATATTGGGATATGAGATGCTTATTTGCAGGTCTCAAGTTTTGGCTGAATCTTTTGCGTACATATCACAAGCTACGCCTAAATCTCTGCAGGGTGGTCTATTTATGCAATTCAAGAATGAGAATGCTACAGGACCAGGTGTACTGAGGGAGTGGTTTGTTTTGGTGTGTCAGGAAATATTTAATCCAAAAAATGCTCTTTTTGCGACATGTCCAAATGACCAAAGGAGATTTTTTCCAAATACTGCATCTAAGGTAAATCATCTGCACCTAAAGTACTTCATCTTCTCTGGACGTATTATTGCATTAGCTTTGAAGAAGAAGGTGCACGTGGGTATTGTTTTTGATCGTGTGTTTTTCAAGCAATTGGCTGGAAACTATACTATTACTTTAGAAGATATTCGGGATGCAGATCCTATAATGTATCGTAGCTGCAAGCAAATATTGGAGATGGATGCTGATTATATTGATTCGGATGCATTAGGACTGACATTTTCTATAGAGGTAGCGGAATTAGGACACAGGGAAGTGATTGAGCTCTGCCCTGGTGGAGAAAGCCTTGTTGTGGATAGTAAGAACAGGGAGAAGTATGTTCATCTTCTTATACAGAATCGTTTTGTGACATCCATATCTGAGCAGGTATCACATTTTGCCGAGGGTTTTGATGATATTATATCTGGCTCAAGTCTAGAGTTCTTTCAATTTTTAGACCTTGAAGATTTTGATTGGATGTTGCATGGGAGTGAGAATGCCATTTCTGTTGAAGATTGGAAGGCACATACCAAGTATCATGGCTATAAAGAGAATGATCGTCAGATATCATGGTTTTGGAAGATCGTTGGGAGAATGTCGGCAGAGCAAAAGAAAGTTCTTCTGTTCTTTTGGACATCTGTGAAACATTTACCTGTTGAAGGTTTCCGTGGCTTGAATTCTTGTCTACTCATTTGCAAATCCAGCAAACCTGATAATTACTTGCCCTCATCTCACACATGTTTTTACAAGCTGTGCTTTCCCCCATATTCTTCTATGGCTATCATGCAAGATCGCATTGGAATCATCACTCAAGAACATATCAGCTGCAGTTTTGGTACTCCATAA 2487 0.4053 MSRIPKTIAGGCFNQQSINGATADHHNNHLPELKLNDTKTSSSRLQFFVRMMWKCDTIVIRASKEDTVKSLLEIISSKTKIPIEHQRLIYRGKQLQREQSLGECGIENDANLQLIGHLKSIGRSFVWNATDDIVSLILKLCRGGSVIGASIIIHNHFLEYVDNPEYLYVFKFMKIPSLLVALYISPYASNAGIADLSVKNFVKYCLDVKGKTLQDCYLEVLLEFCELLRGIGCKCDHPMYVCCRDGFATLLTRLGGVPCENPKRKVLLRGGFDFVHELVDGLLRYLDLSMKCLTGEGLSCNVVKDFVKLSGPLRMGFSEQQAALDEYLNCGICYEEDPLFEGVLDRLHNVFIQLLSKMDECLQVMEDCLVNKVQGKGVGDVIHNRWSSYLIILKELYHISKFYSGAQEKFWGLFLRRKNVLPHMIVRYVKKTDDHRWLLENRTVTDFESRRHLATMLFPDLQDEILGYEMLICRSQVLAESFAYISQATPKSLQGGLFMQFKNENATGPGVLREWFVLVCQEIFNPKNALFATCPNDQRRFFPNTASKVNHLHLKYFIFSGRIIALALKKKVHVGIVFDRVFFKQLAGNYTITLEDIRDADPIMYRSCKQILEMDADYIDSDALGLTFSIEVAELGHREVIELCPGGESLVVDSKNREKYVHLLIQNRFVTSISEQVSHFAEGFDDIISGSSLEFFQFLDLEDFDWMLHGSENAISVEDWKAHTKYHGYKENDRQISWFWKIVGRMSAEQKKVLLFFWTSVKHLPVEGFRGLNSCLLICKSSKPDNYLPSSHTCFYKLCFPPYSSMAIMQDRIGIITQEHISCSFGTP* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3150 828 ProSiteProfiles Ubiquitin domain profile. 45 115 IPR000626 GO:0005515
Mal4g3150 828 Gene3D Hect, E3 ligase catalytic domain 589 672 - -
Mal4g3150 828 Pfam HECT-domain (ubiquitin-transferase) 518 819 IPR000569 GO:0004842
Mal4g3150 828 PANTHER HECT DOMAIN UBIQUITIN-PROTEIN LIGASE 32 825 - -
Mal4g3150 828 Gene3D Hect, E3 ligase catalytic domain 712 827 - -
Mal4g3150 828 SMART ubq_7 45 117 IPR000626 GO:0005515
Mal4g3150 828 SUPERFAMILY Hect, E3 ligase catalytic domain 469 813 IPR035983 GO:0004842
Mal4g3150 828 SMART hect_3 487 826 IPR000569 GO:0004842
Mal4g3150 828 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UPL5 32 825 - -
Mal4g3150 828 ProSiteProfiles HECT domain profile. 489 828 IPR000569 GO:0004842
Mal4g3150 828 CDD HECTc 469 826 IPR000569 GO:0004842
Mal4g3150 828 Gene3D - 37 126 - -
Mal4g3150 828 Pfam Ubiquitin family 48 117 IPR000626 GO:0005515
Mal4g3150 828 Gene3D Hect, E3 ligase catalytic domains 472 702 - -
Mal4g3150 828 SUPERFAMILY Ubiquitin-like 40 118 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3150 Mal-Chr4 92815547 92819984 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3150 45 119 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 32.000 9.31e-07 47.0