Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3124 ATGGTTTCTCTAGAAGATTCTCGTTCGAATTCAAATCGTTTTCAATTACCACGAACCTATCAATATCATTCATCTGTTTCTTCAAAATCACAGCGAAACATAGGAAGATCCATGCGAACAAGGAGATCCAGTATCTTCGATGAAGACAACAGTAGTTGCACTTTCACCGAGAGATCCACCTGTGTATCGGAAAATCTCACCGATTCCGTCGTCGACCTCCGTCTCGGCGAACTCGCTTCCCGGAACATCAAATCCGGAAAATCATCGACATCGGAGCAAGAGCTTTTAGATCTTTCTCAAGTTTTTAGTGAGTTTTCTGCTTGTAGTAGTGATATCTCCGGTGAGCTTCAGCGGTTGGCGACGTTACCGTCGCCGGAGTGTAATCTGAAGAGTGACGGTGGAAGTGGTGGTGATGGTGAGGTTGAAGTAGTTGAACCGGAGCCTTGCATGGGGTTTTTACAGAGAGAGAATTTCTCAACGGAGATTATTGAGAGTATTTCGCCGGAGGATCTTCAACCGACGGTGAAGCTTTGCGTAGACGGTTTACAGTCGTCTTCGGTGGCTGTGAAACGGTCTGCTGCTGCGAAATTGAGGTTGCTTGCTAAGAATCGTTCTGATAATCGAATTTTGATTGGTGAATCCGGTGCTGTACCACTTCTGGTTCCTCTGCTTCGTTGCAGTGATCCATGGACTCAAGAGCACGCTGTAACGGCGCTGTTGAATCTTTCTCTTCATGAAGATAACAAGAAACTGATATTTAATGCAGGAGCTGTGAAATCGTTGATTTATGTATTGAAAACAGGGACGGAGACTTCTAAGCAGAACGCGGCTTGCGCGCTTCTGAGCTTAGCGTTGGTGGAAGAGAATAAGAGCTCAATTGGAGCTTCTGGGGCGATTCCACCGCTGGTTTCGCTGCTGTTGAATGGTTCGAACAGAGGGAAAAAGGATGCGTTGACGACGCTGTACAAGCTTTGTTCTGTTAAACAGAACAAAGAGAGAGCGGTGAGTGCTGGTGTGGTGAAGCCGTTGGTGGAGCTGGTGGCTGAGCAAGGGAATGGGATGATGGAGAAAGCAATGGTGGTGTTGAATAGCTTAGCGGGGATTGATGAAGGGAAGGAAGCGATTGTGGAAGAAGGTGGAATAGCGGCGCTTGTTGAAGCCATTGAAGATGGGTCTGTGAAAGGAAAGGAATTTGCTGTTTTGACTCTTTTGCAGCTTTGTGCGGAAAGTGTTACCAACAGAGGATTGCTTGTTAGAGAAGGTGGGATTCCTCCTCTTGTGGCTCTTTCCCAGAATGGAACTCCTCGAGCTAAGCATAAGGCTGAGACACTGCTTCGATATTTGAGGGAATCAAGACAAGAAGCATCAACTTCGACTTCTTAG 1383 0.4671 MVSLEDSRSNSNRFQLPRTYQYHSSVSSKSQRNIGRSMRTRRSSIFDEDNSSCTFTERSTCVSENLTDSVVDLRLGELASRNIKSGKSSTSEQELLDLSQVFSEFSACSSDISGELQRLATLPSPECNLKSDGGSGGDGEVEVVEPEPCMGFLQRENFSTEIIESISPEDLQPTVKLCVDGLQSSSVAVKRSAAAKLRLLAKNRSDNRILIGESGAVPLLVPLLRCSDPWTQEHAVTALLNLSLHEDNKKLIFNAGAVKSLIYVLKTGTETSKQNAACALLSLALVEENKSSIGASGAIPPLVSLLLNGSNRGKKDALTTLYKLCSVKQNKERAVSAGVVKPLVELVAEQGNGMMEKAMVVLNSLAGIDEGKEAIVEEGGIAALVEAIEDGSVKGKEFAVLTLLQLCAESVTNRGLLVREGGIPPLVALSQNGTPRAKHKAETLLRYLRESRQEASTSTS* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3124 460 Gene3D - 159 315 IPR011989 -
Mal4g3124 460 MobiDBLite consensus disorder prediction 22 43 - -
Mal4g3124 460 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 215 257 IPR000225 GO:0005515
Mal4g3124 460 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 297 339 IPR000225 GO:0005515
Mal4g3124 460 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 338 380 IPR000225 GO:0005515
Mal4g3124 460 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE 6 457 - -
Mal4g3124 460 PANTHER U BOX DOMAIN-CONTAINING 6 457 - -
Mal4g3124 460 MobiDBLite consensus disorder prediction 22 40 - -
Mal4g3124 460 Pfam Armadillo/beta-catenin-like repeat 205 243 IPR000225 GO:0005515
Mal4g3124 460 Pfam Armadillo/beta-catenin-like repeat 288 326 IPR000225 GO:0005515
Mal4g3124 460 Gene3D - 316 459 IPR011989 -
Mal4g3124 460 SUPERFAMILY ARM repeat 172 449 IPR016024 -
Mal4g3124 460 SMART arm_5 368 408 IPR000225 GO:0005515
Mal4g3124 460 SMART arm_5 410 450 IPR000225 GO:0005515
Mal4g3124 460 SMART arm_5 204 244 IPR000225 GO:0005515
Mal4g3124 460 SMART arm_5 245 285 IPR000225 GO:0005515
Mal4g3124 460 SMART arm_5 286 326 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3124 Mal-Chr4 92539060 92541064 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3124 152 453 U-box Gene Family AT2G23140 49.677 6.53e-86 274