Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3118 ATGCAACCTTTTCAAAGGAACCCAAATTCAGCTGGTATACATTTATACCACCAGCAACAGATTGGTTCAAACAACACTCATTACCAAGCATTGCAAAACAATCCAATTAATGGTAGTAGCAGTCAAAGAACCAATGTTTCTTTGGAAACAAGCAACAATGAGAAGACATTCTATACCTTGGAATCTTCTCAAGCAACCAATGGTTTCATAGCTTTTGATTCATCCAACAATAGAAGTCATTTTCCACCACAAGTTTCTCACCGTTATACCTCTAACAACATTACGAATGGATTGCCGATGAGTGTTTACTCTAGTGCAGACAATGATAGCTTTGAACTTAGGCGCAAACTTAAAGAATTGGAGAATTCAATGTTAAGTCCGGATTCAGATATCGTCGACAGCTGTCAGTCAAACACAAACGGTAGCCTCCACCAAGGTACAGCTCAATATAATTGGTATCAAATTGAAGAAATGATTCCAAATCTAGACTTGAAAGAAGAACTTATTAGATGTGCAAAAGCTGTTTCTGATGGTGATAGTAAAAGAGCATTAGGGTTCATGAATGATGTGTTGGCAAACATGGTATCGGTTAGCGGTTCTCCAATTGAAAGGTTAGGTGCTTACATGTTGGAGGGATTAAGAGCAAGGTTGGAATCATCAGGGAGTGCAATTTATAATGCATTGAAATGTGAAGAACCAACAAGCGGCGAATTGATGAGTTCTATGCACTTTTTGTATCAGATTTGCCCGTATTGGAAGTTCGGTTACATATCTTCCAATGCTGCCATTTATGAAGCAATGCAAAATGAATCAAGAATTCACATAATTGACTTCCAAATTGCACAAGGAACACAGTGGATGTTACTTTTGAAGGCTCTAAAGAATAGACCCGGTGGACCTCCATTCGTTCGTGTAACAGGTATCGATGATTTGCAATCGTTTCATGCTAGAGGCGGAGGACTTCATATTGTAGGAAAAATGCTAGCAGATTATGCAAACACTTGGAAAATTCCGTTTGAGTTCAATAGTGTTGCAATATATGGATGTGGGGTTCAACTAGAAGATTTTGCAGTTCAACAAGGTGAAGCTCTTGCTGTCAATTTCCCTTTTGCTTTGCATCACATACCGGATGAGAGCGTTAGCGTAGAGAATCATAGAGACCGGCTTTTGAGATTGGTGAAGAATTTGTCGCCTAAGGTTGTGTTATTTGTGGAGCAAGAATCAAACACAAACACTTCTCCATTTTTTCCAAGGTTTGTTGAGACTTTGAATTATTACTCTGCTATGTTTGAATCAATTGATGTAGATCTTCCTAGAGATGATAAGAAGAGAATTAATGCAGAACAACACTGCGTGGCTCGTGATATCGTTAACATCATAGCTTGTGAGGGAGCCGAGAGAGTGGAAAGACATGAACTGTTTGGAAAATGGAGGGCAAGATTTTCAATGGCGGGTTTTGTACCGTTACCGTTGAGTCCTTCGGTGATTGATTCAGTTAGAACTCTCTTGAAAGATTTCAATGGAAATTTTAGGATTGAACAAACAGATGTTGCTATCTATTTAGCGTGGAAGAATAAAGCTATGTGCACATCTTCTGCTTGGAGATGTTATTTATAG 1617 0.3878 MQPFQRNPNSAGIHLYHQQQIGSNNTHYQALQNNPINGSSSQRTNVSLETSNNEKTFYTLESSQATNGFIAFDSSNNRSHFPPQVSHRYTSNNITNGLPMSVYSSADNDSFELRRKLKELENSMLSPDSDIVDSCQSNTNGSLHQGTAQYNWYQIEEMIPNLDLKEELIRCAKAVSDGDSKRALGFMNDVLANMVSVSGSPIERLGAYMLEGLRARLESSGSAIYNALKCEEPTSGELMSSMHFLYQICPYWKFGYISSNAAIYEAMQNESRIHIIDFQIAQGTQWMLLLKALKNRPGGPPFVRVTGIDDLQSFHARGGGLHIVGKMLADYANTWKIPFEFNSVAIYGCGVQLEDFAVQQGEALAVNFPFALHHIPDESVSVENHRDRLLRLVKNLSPKVVLFVEQESNTNTSPFFPRFVETLNYYSAMFESIDVDLPRDDKKRINAEQHCVARDIVNIIACEGAERVERHELFGKWRARFSMAGFVPLPLSPSVIDSVRTLLKDFNGNFRIEQTDVAIYLAWKNKAMCTSSAWRCYL* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3118 538 PANTHER SCARECROW-LIKE PROTEIN 13 19 534 IPR030005 -
Mal4g3118 538 Pfam GRAS domain family 164 535 IPR005202 -
Mal4g3118 538 Coils Coil 103 123 - -
Mal4g3118 538 ProSiteProfiles GRAS family profile. 155 535 IPR005202 -
Mal4g3118 538 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 19 534 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3118 Mal-Chr4 92439035 92440651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3118 1 535 GRAS Transcription Factor Family AT4G17230 50.826 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mal4g3118 GRAS 3e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3118 - - mtr:MTR_2g026250 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5561 5 130254156 130255796 Mal4g3118 4 92439035 92440651 PCT