Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3111 ATGGGTCGTTCTCGTGGTAATTTTCATCATAACGATGATGATCCAAGCCAAAGGTCAAGGAGAAAGAAGAATGCTGCAAGTGGTGATAACTCTGAATCTGGACCTGCAGGTCAAGGAGCAGGCGAAGCAAAAAGGGCTTTGTATCATTGCAATTACTGTAATAAAGATATTACAGGAAAAATCCGTATTAAGTGTGCCATCTGCCCAGATTTTGACTTGTGTATTGAGTGCTTTTCTGTTGGAGCTGAGGTGACACCCCACAAAAGCCATCATTCTTACAGGGTCATGGATAATTTGTCTTTCCCTCTTATTTGCCCAGACTGGAACGCAGATGATGAAATTTTGCTTCTAGAGGGAATTGAAATGTATGGCATGGGAAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAACAAAGAAGCATGCATAGAACACTATAGGAATGTGTACTTAAACTCTCCGTTCTTCCCTCTTCCGGACATGTCTCATGTTGTTGGGAAAAACAGAAAAGAACTTCTTGCCATGGCCAAAGGGCAGGGTGACGACAAGAAAGGACTTCCCATGGGGGATCTTAGCATAAAGGAAGAATCGCCCTTTTCTCCGTCTGGAGTCAAAATCGAAGACTCCAACAAATCTGGTTCCACTGGCCGTTTGACTTCGAATATGAATTCAGGGTCGGATTCTGGGCCCTCAGTCAACACACATGCTGCAGCTAGTGCTAACCAAAAGGCATCCAATAAAGGCCGGGGAAAAGGTGGTCCCGGAATCGTTAAAATGGAAGATTCTCCAATGGACAGAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGAAGGCCCTTCTTTAGTTGAAGCCAGTGGTTATAACGCAAAAAGACAGGAATTTGATCCTGAATACGATAATGATGCCGAGCAATTACTCGCTGAAATGGAATTTAAGGACACTGACACTGAGGAAGAGCGAGAGATCAAACTTCGTGTGCTGCGTATCTATTCAAAAAGGCTTGATGAAAGAAAGCGCAGGAAGGAATTCATTCTTCAAAGAAATTTGTTATATCCAAATCCATTTGAGAAGGATTTAACACCTGAGGAAAAGGCAATATGCCGGAAATATGACATGTTCATGCGCTTTCATACTAAGGAAGAGCACGATGAATTGCTTCAAACCGTTATCTCTGAACATAGAACTCTTAAAAGAATTCAAGAGCTTAAGGAAGCCCGTGCTGCTGGTTGCCGCAGTTCAGCTGAAGCAGATAGATATCTGGCACAAAAGAGAAGAAAGGAAGCTGACGAAAATGCCCGTAGAGCAAGAGAAAGTGTTCATGTCGGCCCAAACAATCATGGGGTTCCAAGTGCATTAATGTCTCCAGACTCTGGTGGTACAAGACCTGCAGGGCCAGCTACTTCAAGTTCTGTCAATGAAATGGATGCAACAGGATACTATGGATCTGATTTCCTTTCTGAACCTGAGAAGCGTTTGTGCTATGAGCTAAGGTTGCCTCCTGCTGTGTATCTAAATATGCAACAGCAGCTGTCTGTAGAAATGATTAAGGGCACCGTCTCTTCGAAATTGGATGCTCATCAAATGTTCAAGATTGATACCGTGAAAATTGACAGGGTGTATGATATGCTCATTAAGAAGGGAATTGGTTCACCCTGA 1665 0.4312 MGRSRGNFHHNDDDPSQRSRRKKNAASGDNSESGPAGQGAGEAKRALYHCNYCNKDITGKIRIKCAICPDFDLCIECFSVGAEVTPHKSHHSYRVMDNLSFPLICPDWNADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHYRNVYLNSPFFPLPDMSHVVGKNRKELLAMAKGQGDDKKGLPMGDLSIKEESPFSPSGVKIEDSNKSGSTGRLTSNMNSGSDSGPSVNTHAAASANQKASNKGRGKGGPGIVKMEDSPMDRDFGGNKPNSSRNEGPSLVEASGYNAKRQEFDPEYDNDAEQLLAEMEFKDTDTEEEREIKLRVLRIYSKRLDERKRRKEFILQRNLLYPNPFEKDLTPEEKAICRKYDMFMRFHTKEEHDELLQTVISEHRTLKRIQELKEARAAGCRSSAEADRYLAQKRRKEADENARRARESVHVGPNNHGVPSALMSPDSGGTRPAGPATSSSVNEMDATGYYGSDFLSEPEKRLCYELRLPPAVYLNMQQQLSVEMIKGTVSSKLDAHQMFKIDTVKIDRVYDMLIKKGIGSP* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3111 554 SUPERFAMILY Homeodomain-like 465 551 IPR009057 -
Mal4g3111 554 SUPERFAMILY Homeodomain-like 101 154 IPR009057 -
Mal4g3111 554 Gene3D - 469 552 IPR036388 -
Mal4g3111 554 Pfam Zinc finger, ZZ type 47 88 IPR000433 GO:0008270
Mal4g3111 554 PIRSF Txn_adaptor_ADA2 36 554 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal4g3111 554 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 553 - -
Mal4g3111 554 SMART zz_5 44 89 IPR000433 GO:0008270
Mal4g3111 554 MobiDBLite consensus disorder prediction 425 476 - -
Mal4g3111 554 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 553 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal4g3111 554 SMART sant 104 153 IPR001005 -
Mal4g3111 554 MobiDBLite consensus disorder prediction 1 27 - -
Mal4g3111 554 Gene3D - 102 153 - -
Mal4g3111 554 Pfam Myb-like DNA-binding domain 107 150 IPR001005 -
Mal4g3111 554 ProSiteProfiles SWIRM domain profile. 468 554 IPR007526 GO:0005515
Mal4g3111 554 MobiDBLite consensus disorder prediction 1 40 - -
Mal4g3111 554 MobiDBLite consensus disorder prediction 177 191 - -
Mal4g3111 554 MobiDBLite consensus disorder prediction 425 443 - -
Mal4g3111 554 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Mal4g3111 554 MobiDBLite consensus disorder prediction 270 284 - -
Mal4g3111 554 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Mal4g3111 554 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Mal4g3111 554 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
Mal4g3111 554 CDD ZZ_ADA2 48 96 IPR041983 -
Mal4g3111 554 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Mal4g3111 554 SUPERFAMILY RING/U-box 48 110 - -
Mal4g3111 554 MobiDBLite consensus disorder prediction 177 284 - -
Mal4g3111 554 CDD SANT 108 150 IPR001005 -
Mal4g3111 554 Gene3D - 40 96 IPR043145 -
Mal4g3111 554 MobiDBLite consensus disorder prediction 204 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3111 Mal-Chr4 92288787 92293335 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3111 1 552 EF-hand Containing Proteins AT3G07740 44.483 3.28e-155 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal4g3111 Myb_DNA-binding 2.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3111 K11314 - gmx:100811887 953.355