Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3109 ATGGAGGTTTATCCCAAGAAAAAACCATCGAAGGAGGCATTAGAGGAATTGTCAAGGAGAAAGAAGAATGCTGCAAGTGGAGATAATTCAGAATCTGCAGGTCAAGGATCAGGTGAAGCGAAAAGGGCTTTGTATCATTGCAATTACTGTAAGAAAGATATTACAGGAAAAATCCGTATCAAGTGTGCTGTGTGCCCAGATTTTGACTTATGTGTGGACTGTTTTTCTGTTGGAGTTGAAGTGACACCCCACAAAAGCAATCATGCTTACAGGATCATGGATAATTTGTCTTTCCCCCTCCTTTGCCCAGACTGGACCGCAGATGAAGAAAGTTTGCTTCTAGAGGGACTTGAAATGTATGGGATGGGAAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAGCAAAGAGACATGCATGGAACACTATAGGAATGTGTACCTGAACTCTCCATGTTTCCCTCTTCCGGACATGTCTCATCTTGCTGGGAAAAACAGAGAAGATCTTCTTGCCATGGCGAAAGGGAAGGGTGAAGACAAAAAAGGATCCGGTTCTGGGTCCGCAGTCAACACAAATGCTGCAGCTAGTGCTAACCGAAAGGCATCCAACAGAGGCCGGGGAAAAGCTCGAATGGACAAAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGACGGCCCTTCTTTGGTTGAAGCCAGTGGTTATAACCCTAAAAGACAGGAATTTGACATTGAATTTGATAATGATGCTGAGAAATTACTCGCCGAAATGGAGTTTAATGAGAGTGACACTAAGGAGGAGCATGAGCTCAAACTTCGTGTGATACGTATCTATAATAAAACCCTTGATGAAAGAGAGCGCAGGAAGAAATTCATAGCTGAAAGAAATTTGCTAGATCCAAATCCATTTGAGAAGGATTTAACACCCGAGGAAAAGAAATTATGCCGGCAATATGACATGCTCATGCGCTTTCATTCTAAGGAAAATCATGAAGAATTTCTTAGAACTGTAATCAATGAACACAGAACTCTGAAAAGAATTCAAGAGCTTAAGGAAGCCCGTGCTGCTGGTTGCCGCAGTTCAGCTGAAGCAGATATATATCTGGCAGAAAAGAGAAGAAAGGAAGCTGAAGAAAGTGCTCGTAGGGCTGGAAAAAGTGTTCATGTGGTCCCGAAAAAACACGGGGTTTCGACTGCATTGATGTCTCCAGACTCTGCTGGTACCAAACCTGCTGGGCCAGCTAGTTCAAGTTCTGTCAATGAAAAGGCTGCCGCAGATTTACTTTCTGAAGTTGAGAAACGTTTGTGCAGCGAGTTAAGCTTGTCTCCAGCTGTGTATCTGAAGATGCAAGAGGACATGTCGGTACAAATGATTGCTGGCAATGTCTCTTCGAAAGCCGATGCTCGTGAAATGTTCAAGATGGATACCATGAAAGTTGACATGGTGTATGATATGCTCATTAAGAAGGGAATAGGTTCACCCTGA 1491 0.4319 MEVYPKKKPSKEALEELSRRKKNAASGDNSESAGQGSGEAKRALYHCNYCKKDITGKIRIKCAVCPDFDLCVDCFSVGVEVTPHKSNHAYRIMDNLSFPLLCPDWTADEESLLLEGLEMYGMGNWAEVAEHVGTKSKETCMEHYRNVYLNSPCFPLPDMSHLAGKNREDLLAMAKGKGEDKKGSGSGSAVNTNAAASANRKASNRGRGKARMDKDFGGNKPNSSRNDGPSLVEASGYNPKRQEFDIEFDNDAEKLLAEMEFNESDTKEEHELKLRVIRIYNKTLDERERRKKFIAERNLLDPNPFEKDLTPEEKKLCRQYDMLMRFHSKENHEEFLRTVINEHRTLKRIQELKEARAAGCRSSAEADIYLAEKRRKEAEESARRAGKSVHVVPKKHGVSTALMSPDSAGTKPAGPASSSSVNEKAAADLLSEVEKRLCSELSLSPAVYLKMQEDMSVQMIAGNVSSKADAREMFKMDTMKVDMVYDMLIKKGIGSP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3109 496 Gene3D - 37 93 IPR043145 -
Mal4g3109 496 SUPERFAMILY Homeodomain-like 420 493 IPR009057 -
Mal4g3109 496 CDD ZZ_ADA2 45 93 IPR041983 -
Mal4g3109 496 ProSiteProfiles SANT domain profile. 100 152 IPR017884 -
Mal4g3109 496 MobiDBLite consensus disorder prediction 403 420 - -
Mal4g3109 496 ProSiteProfiles SWIRM domain profile. 410 496 IPR007526 GO:0005515
Mal4g3109 496 MobiDBLite consensus disorder prediction 175 243 - -
Mal4g3109 496 SUPERFAMILY Homeodomain-like 98 151 IPR009057 -
Mal4g3109 496 MobiDBLite consensus disorder prediction 1 36 - -
Mal4g3109 496 MobiDBLite consensus disorder prediction 398 420 - -
Mal4g3109 496 SMART zz_5 41 86 IPR000433 GO:0008270
Mal4g3109 496 Gene3D - 100 150 - -
Mal4g3109 496 MobiDBLite consensus disorder prediction 1 26 - -
Mal4g3109 496 CDD SANT 120 147 IPR001005 -
Mal4g3109 496 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 10 495 - -
Mal4g3109 496 SMART sant 101 150 IPR001005 -
Mal4g3109 496 Pfam Myb-like DNA-binding domain 104 147 IPR001005 -
Mal4g3109 496 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 10 495 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal4g3109 496 MobiDBLite consensus disorder prediction 206 220 - -
Mal4g3109 496 ProSitePatterns Zinc finger ZZ-type signature. 47 74 IPR000433 GO:0008270
Mal4g3109 496 Pfam Zinc finger, ZZ type 44 79 IPR000433 GO:0008270
Mal4g3109 496 ProSiteProfiles Myb-like domain profile. 105 148 IPR001005 -
Mal4g3109 496 MobiDBLite consensus disorder prediction 185 200 - -
Mal4g3109 496 Gene3D - 412 494 IPR036388 -
Mal4g3109 496 PIRSF Txn_adaptor_ADA2 32 496 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal4g3109 496 ProSiteProfiles Zinc finger ZZ-type profile. 42 98 IPR000433 GO:0008270
Mal4g3109 496 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 152 IPR017930 -
Mal4g3109 496 SUPERFAMILY RING/U-box 45 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3109 Mal-Chr4 92252792 92257711 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3109 8 494 EF-hand Containing Proteins AT3G07740 41.360 1.19e-133 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal4g3109 Myb_DNA-binding 2.3e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3109 K11314 - gmx:100815514 671.389