Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3108 ATGGAGGTTTATCCCAAGAAAAAACCATCGAAGGAGGCATTAGAGGAATTGTCAAGGAGAAAGAAGAATGCTGCAAGTGGAGATAATTCAGAATCTGGATCTGCAGGTCAAGGAGCAGGTGAAGCGAAAAGGGCTTTGTATCATTGCAATTACTGTAAGAAAGATATTACAGGAAAAATCCGTATCAAGTGTGCTGTGTGCCCAGATTTTGACTTATGTGTGGACTGTTTTTCTGTTGGAGTTGAAGTGACACCCCACAAAAGTAATCATGCTTACAGGATCATGGATAATTTGTCTTTCCCCCTCCTTTGCCCAGACTGGACCGCAGATGAAGAAAGTTTGCTTCTAGAGGGACTTGAAATGTTTGGGATGGGAAACTGGGCAGAAGTTGCTGAGCATGTTGGAACAAAGAGCAAAGAGACATGCATGGAACACTATAGGAATGTGTACCTGAACTCTCCATGTTTCCCTCTTCCGGACATGTCTCATCTTGCTGGGAAAAACAGAGAAGATCTTCTTGCCATGGCGAAAGGGAAGGGTGAAGACAAAAAAGGATCCGGTTCTGGGTCCGCAGTCAACACAAATGCTGCAGCTAGTGCTAACCGAAAGGCATCCAACAGAGGCCGGGGAAAAGCTCGAATGGACAAAGATTTTGGAGGAAATAAGCCAAATTCCTCAAGAAATGACGGCCCTTCTTTGGTTGAAGCCAGTGGTTATAACCCTAAAAGACAGGAATTTGACATTGAATATGATAATGATGCTGAGAAATTACTCGCCGAAATGGAGTTTAATGAGAGTGACACTAAGGAGGAGCATGAGCTCAAACTTCGTGTGATACGTATCTATAATAAAACCCTTGATGAAAGAGAGCGCAGGAAGAAATTCATAGCTGAAAGAAATTTGCTAGATCCAAATCCATTTGAGAAGGATTTAACACCCGAGGAAAAGAAATTATGCCGGCAATATGACATGCTCATGCGCTTTCATTCTAAGGAAAATCATGAAGAATTTCTTAGAACTGTAATCAATGAACACAGAACTCTGAAAAGAATTCAAGAGCTTAAGGAAGCCCGTGCTGCTGGTTGCCGCAGTTCAGCTGAAGCAGATATATATCTGGCAGAAAAGAGAAGAAAGGAAGCTGAAGAAAGTGCTCGTAGGGCTGGAAAAAGTGTTCATGTGGTCCCGAAAAAACACGGGGTTCCGACTGCATTGATGTCTCCAGACTCTGCTGGTACCAAACCTGCTGGGCCAGCTAGTTCAAGTTCTATCAATGAAAAGGCTGCAGCAGATTTACTTTCTGAAGTTGAGAAACGTTTGTGCAGCGAGTTAAGCTTGTCTCCAGCTGTGTATCTGAAGATGCAAGAGGACATGTCGGTACAAATGATTGCTGGCAATGTCTCTTCGAAAGCCGATGCTCGTGAAATGTTCAAGATGGATACCATGAAAGTTGACATGGTGTATGATATGCTCATTAAGAAGGGAATAGGTTCACCCTGA 1497 0.4315 MEVYPKKKPSKEALEELSRRKKNAASGDNSESGSAGQGAGEAKRALYHCNYCKKDITGKIRIKCAVCPDFDLCVDCFSVGVEVTPHKSNHAYRIMDNLSFPLLCPDWTADEESLLLEGLEMFGMGNWAEVAEHVGTKSKETCMEHYRNVYLNSPCFPLPDMSHLAGKNREDLLAMAKGKGEDKKGSGSGSAVNTNAAASANRKASNRGRGKARMDKDFGGNKPNSSRNDGPSLVEASGYNPKRQEFDIEYDNDAEKLLAEMEFNESDTKEEHELKLRVIRIYNKTLDERERRKKFIAERNLLDPNPFEKDLTPEEKKLCRQYDMLMRFHSKENHEEFLRTVINEHRTLKRIQELKEARAAGCRSSAEADIYLAEKRRKEAEESARRAGKSVHVVPKKHGVPTALMSPDSAGTKPAGPASSSSINEKAAADLLSEVEKRLCSELSLSPAVYLKMQEDMSVQMIAGNVSSKADAREMFKMDTMKVDMVYDMLIKKGIGSP* 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3108 498 Pfam Zinc finger, ZZ type 46 81 IPR000433 GO:0008270
Mal4g3108 498 ProSiteProfiles SANT domain profile. 102 154 IPR017884 -
Mal4g3108 498 MobiDBLite consensus disorder prediction 1 38 - -
Mal4g3108 498 PIRSF Txn_adaptor_ADA2 34 498 IPR016827 GO:0003713|GO:0006357|GO:0035065
Mal4g3108 498 ProSitePatterns Zinc finger ZZ-type signature. 49 76 IPR000433 GO:0008270
Mal4g3108 498 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 10 497 IPR034318 GO:0003713|GO:0006357|GO:0035065
Mal4g3108 498 MobiDBLite consensus disorder prediction 208 222 - -
Mal4g3108 498 SUPERFAMILY Homeodomain-like 100 153 IPR009057 -
Mal4g3108 498 MobiDBLite consensus disorder prediction 1 26 - -
Mal4g3108 498 SUPERFAMILY Homeodomain-like 420 495 IPR009057 -
Mal4g3108 498 SMART sant 103 152 IPR001005 -
Mal4g3108 498 ProSiteProfiles SWIRM domain profile. 412 498 IPR007526 GO:0005515
Mal4g3108 498 CDD ZZ_ADA2 47 95 IPR041983 -
Mal4g3108 498 MobiDBLite consensus disorder prediction 187 202 - -
Mal4g3108 498 MobiDBLite consensus disorder prediction 177 245 - -
Mal4g3108 498 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 10 497 - -
Mal4g3108 498 CDD SANT 107 149 IPR001005 -
Mal4g3108 498 Pfam Myb-like DNA-binding domain 106 149 IPR001005 -
Mal4g3108 498 Gene3D - 414 496 IPR036388 -
Mal4g3108 498 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 107 154 IPR017930 -
Mal4g3108 498 SUPERFAMILY RING/U-box 47 110 - -
Mal4g3108 498 MobiDBLite consensus disorder prediction 399 421 - -
Mal4g3108 498 Gene3D - 39 95 IPR043145 -
Mal4g3108 498 Gene3D - 102 152 - -
Mal4g3108 498 SMART zz_5 43 88 IPR000433 GO:0008270
Mal4g3108 498 ProSiteProfiles Myb-like domain profile. 107 150 IPR001005 -
Mal4g3108 498 ProSiteProfiles Zinc finger ZZ-type profile. 44 100 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3108 Mal-Chr4 92221702 92226745 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3108 18 496 EF-hand Containing Proteins AT3G07740 42.910 1.71e-134 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal4g3108 Myb_DNA-binding 1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3108 K11314 - gmx:100811887 675.241