Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3104 ATGACTTCTGTAGCTACCACAAATCTATGGATTCGAAAGCAACAATGTCCTTGTGGAGATTGGAAGTGTTACATTACATATGAGAGTGATTCTGAGGAAGGTTCTGCTGCGTCAGAATTGGCGAAATCGGATAAAACACCATCTGCTATCATTACCCCTTATGTTGGAATGGTGTTTAAGAGTGATGATGAAGCTTTTGAGCATTATGGCAACTTTGCTAGGAAGAATGGTTTCTCTATTAGGAAAGAAAGATCTAGAATTAGCCCTCAATTTGGGGTATATAAGCGTGATATTGTTTGTTACCGATCCGGGTTTGCTCCGGTGAAGAAGAAGGCAAATGGTGAACATCATAGAGAAAGGAAATCATTGAGGTGTGGATGTGATGCTAAAATGTACTTGTCTAAGGAGGTTGTTGACGGGGTTTCGCAGTGGTATGTTGTGCAGTTTAGTAATATACATAATCACGAACTTTTGGAAGATGATCAAGTTCGTCTTTTACCTGCTTATCGGAAGATTCATGAGGCGGATCAAGAGCGTATACTCTTGCTTTTGAAAGCCGGGTTTCCGATACATCGGATTGTGAAAATGCTTGAGCTTGAAAAGGGGATTCAAGGTGGGCATTTGTCGTTCTTGGAAAGGGATGTGAGGAACTTTGTCCAAAACCGCAAGAAGGTTATTCAAGAGAATGAGGCTTTGCTAAATGAGAAAATAGAAAATGATGTTTTGGAACTTCTTGAGGTGTGCAAAGCCACGAAAGAAGCTGATGTTGACTTTGTTTATGATTTTACCATGGATGAGAATGAGAAGGTTGAAAATATAGCTTGGTCATATGGTGATTCTGTTAAAGCAAATGCCGTGTTCGGTGATGTAATTTATTTTGACACTTCTTATCGATCGATCACTTATGGATTGCTTTTTGGAGTGTGGTTTGGTATCGGTAGCTGTGGTAGAACCATTTTTTTCGGTTGTGTTTTATTGCAGGACGAAACACCGCAATCCCTCTCATGGGCATTACAGACATTTCTCCGGTTCATGAGAGGAAGATGTCCACAAACAATTCTTTCTGACCTTGACCCTGGGCTTAGAGATGCCATTAGAAGCGAATTTCCTGGGACTAAACACGTCATTCCGGTGTGGAATATTCTGAACAAGGTACCTAGTTGGTTTTCTCTTCCTCTTGGGTCTCGCCTTTCCGAATTTAAATCCAAGTTCAATGCCTTATTCCACATTGAGAAAACAGAGGAATTTGAACTTAAATGGAGCCAAATGGTTTCTGTTTTCGGACTTGGTTCAGATAAACATATTGATTTACTGTATTCGGTTCGAGCATCTTGGGCACCATCCTATGTGAGAGGTTATTTTTTGGCTCAAATGGCGACAGTAGCTTATTCCAAGTCTATAGATGCTTTTATGAAAGGGACTGTCACTGAAAATACATGTTTGCGTAGCTTTTTTGAACAGGTTGGCGTTTCTGCAAATTTTCTTCATCAATCACATAAGGAGACTCACAATACAAATCTTAGAACTGGCATACCAATTGAAGAGCATGCACGGAGCATTCTCACGCCTTATGCTTTCAATGCCTTGCAGCAAGAGCTATTGCTGACAATGCATTATGCTACATCTGAAATAGCCAACGGATCATATATTATACGACACTTCAAAAGGTTGGATGGAGAGCGACAAGTGTTATGGCTACCAGAAAACGAACAGATACACTGCTCTTGCAAGGAATTTGAATCGTCGGGAATATTATGCAGACATGCTCTTCGTGTACTTGTAATGAAGAATTACTTTCAGCTTCCTGACAAATACTATTTAAGTAGATGGCGACGGGAATGTTCTTTACATGTGGAGGATGAGCATAACAACCGAAGTTTTATTGGTGGTGAATGGTTTCAAGAATATCAATCCCTATCTGAAACTTTGTTTTCAGAATCATCAATTACTAAGGAGCGATATGACTATGCTCGCAAAGAACTGACAAAAGAAGTTAATAGGATTCTTAATGAGGTTAGAAATATGCCTGAGACTGATGAAGTCTGCAGCATGAACGTGACGGTTTCGCCAAGTAGCTAG 2079 0.4012 MTSVATTNLWIRKQQCPCGDWKCYITYESDSEEGSAASELAKSDKTPSAIITPYVGMVFKSDDEAFEHYGNFARKNGFSIRKERSRISPQFGVYKRDIVCYRSGFAPVKKKANGEHHRERKSLRCGCDAKMYLSKEVVDGVSQWYVVQFSNIHNHELLEDDQVRLLPAYRKIHEADQERILLLLKAGFPIHRIVKMLELEKGIQGGHLSFLERDVRNFVQNRKKVIQENEALLNEKIENDVLELLEVCKATKEADVDFVYDFTMDENEKVENIAWSYGDSVKANAVFGDVIYFDTSYRSITYGLLFGVWFGIGSCGRTIFFGCVLLQDETPQSLSWALQTFLRFMRGRCPQTILSDLDPGLRDAIRSEFPGTKHVIPVWNILNKVPSWFSLPLGSRLSEFKSKFNALFHIEKTEEFELKWSQMVSVFGLGSDKHIDLLYSVRASWAPSYVRGYFLAQMATVAYSKSIDAFMKGTVTENTCLRSFFEQVGVSANFLHQSHKETHNTNLRTGIPIEEHARSILTPYAFNALQQELLLTMHYATSEIANGSYIIRHFKRLDGERQVLWLPENEQIHCSCKEFESSGILCRHALRVLVMKNYFQLPDKYYLSRWRRECSLHVEDEHNNRSFIGGEWFQEYQSLSETLFSESSITKERYDYARKELTKEVNRILNEVRNMPETDEVCSMNVTVSPSS* 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3104 692 Pfam FAR1 DNA-binding domain 68 158 IPR004330 -
Mal4g3104 692 ProSiteProfiles Zinc finger SWIM-type profile. 561 597 IPR007527 GO:0008270
Mal4g3104 692 PANTHER FAR1-RELATED SEQUENCE 10 ISOFORM 1 27 680 - -
Mal4g3104 692 SMART 26again6 572 599 IPR006564 GO:0008270
Mal4g3104 692 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 27 680 IPR031052 GO:0006355
Mal4g3104 692 Pfam SWIM zinc finger 563 596 IPR007527 GO:0008270
Mal4g3104 692 Coils Coil 215 235 - -
Mal4g3104 692 Pfam MULE transposase domain 290 383 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3104 Mal-Chr4 92162416 92165088 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal4g3104 MULE 6.1e-13 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3104 - - aprc:113874854 1162.9