Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3092 ATGGGAAATGTGAATGGAAGAGAAGAAGATTTCAATGGCACACTTTCATCAGCTTCATCATCTTCATCATCTGAAGTGATTGATTCCATGTCTGCTCTTGATGGGGTTGTTGAAAATCCTTCACCTGTTGAGTTAATGGGTCATTCTCCACCTGCTAGCCCTAGAACAACTCAATCTCCTTTAATGTTCTCTCCTCAAGCTCCGGTGGTTCCACTACAAAGACCTGATGAGATGCAGGCTCCAAACCCTTCCTTGATGCAAACTAATTCAGTTTATGAGGATATGTTTAGTGAAATTGGAATTCCGACAATGATTACTTGGAGTTATGATGGTAAAGAAGTTGCTGTGGAGGGATCATGGGATAATTGGAAAACAAGGATGCCCTTGCAGAGATCAGGAAAGGACTTCACTATAATGAAGGTGCTGCCATCTGGTGTTTACCAGTTTCGCTTTATCGTGGATGGACACTGGAGGTACGCACCTGACTTGCCTTGGGCTCGAGATGATGCTGCCAATACTTACAACATTCTGGACTTACAGGATTCCGTTCCCGAAGACCTTGGAAGTATTTCTAGTTTCGAACCTCCTAAATCACCGGACTCTAGCTACAACAACATACACCTGAGTTCTGAAGATTATGCAAAGGAACCGCCATTGGTTCCTCCATTCATGCAAGCGACTCTTCTTAATGTTCCTTCAGCAAATATGGAATTCCAACCTCTTGTATCCAGACCACAGCATGTAGTGCTCAATCATCTCTATATGCAGAAAGGAAAGACTAGCCCTTCCGTGGTTGCACTCGGGACGACTCATCGGTTTGTAGCCAAATATGTCACTGTGGTGATGTACAAGTCTTTGCAGAGGTAA 867 0.4383 MGNVNGREEDFNGTLSSASSSSSSEVIDSMSALDGVVENPSPVELMGHSPPASPRTTQSPLMFSPQAPVVPLQRPDEMQAPNPSLMQTNSVYEDMFSEIGIPTMITWSYDGKEVAVEGSWDNWKTRMPLQRSGKDFTIMKVLPSGVYQFRFIVDGHWRYAPDLPWARDDAANTYNILDLQDSVPEDLGSISSFEPPKSPDSSYNNIHLSSEDYAKEPPLVPPFMQATLLNVPSANMEFQPLVSRPQHVVLNHLYMQKGKTSPSVVALGTTHRFVAKYVTVVMYKSLQR* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3092 288 SUPERFAMILY AMPKBI-like 183 285 IPR037256 -
Mal4g3092 288 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-2 1 288 - -
Mal4g3092 288 Pfam 5'-AMP-activated protein kinase beta subunit, interaction domain 214 284 IPR006828 GO:0005515
Mal4g3092 288 PANTHER SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 1 288 IPR043554 -
Mal4g3092 288 MobiDBLite consensus disorder prediction 9 29 - -
Mal4g3092 288 Pfam Glycogen recognition site of AMP-activated protein kinase 101 181 IPR032640 -
Mal4g3092 288 Gene3D - 190 286 - -
Mal4g3092 288 Gene3D Immunoglobulins 96 183 IPR013783 -
Mal4g3092 288 SUPERFAMILY E set domains 101 180 IPR014756 -
Mal4g3092 288 CDD E_set_AMPKbeta_like_N 102 178 - -
Mal4g3092 288 MobiDBLite consensus disorder prediction 1 60 - -
Mal4g3092 288 SMART AMPKBI_2 196 286 IPR006828 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3092 Mal-Chr4 91979122 91982434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3092 100 181 Protein tyrosine phosphatase (PTP) family AT3G01510 32.955 1.16e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3092 K07199 - gmx:100777497 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5579 5 130472626 130476267 Mal4g3092 4 91979122 91982434 PCT