Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3089 ATGGACAGCATGAACCTCCTCGCCGGCGACCGTGTTTCTCCATTTCCCGACTCCGGCAACCTTCTCTTCGCCGCCGGCCTCCTCTCCAACCACCACAGTCCCCAAAAACTCATCCCCATCAGGTCCATCCCTCCTCCTCCTGGTTTCCATGCTAACTCCCCTCTCCACCCTCCACCACCTTACACCAAGTCTGAGGACCCGTCTGGATCCGGGTCGGGTCATTCATCGTTCCCCATTGGACAAGAACCCGGCTCATCTTTGGATGACGTGGGCAATTCATCTGCGAGTACTAAAGAATTCGAGTCCAGAAAGAGAAGGAAAAAGACGGCGAGAAAGATGGAAGATTTTGCAGCAAATTTGGTAAAGAAGATGACGGAAAAGCAAGAGAAGATGCATAGCGAATTGGTGGAAATGATAGAGAAGATGGAAAAGGAAAGAGTGGAAAGAGAAGAAGCTTGGAGGCGTGAGGAGATGGAAAGAATTAAGCAGGACGAAGAAGCTAGAGCGGCTGAAAGGTCTCGTAGTTTAGCTCTCGTATCGCTCATTCAGAAACTATTGGGTCATGAAATTCAGATTCCTCCACCAGCAGAAGGAAGCGGAGTAAGAGAAGAGGAGGAAGTTGAGGTGAACAATAACAACAACAACAGCCAACCCTTAACCCACTGCATGGGGTCGGCTGAGGTGAACAACAACAGCCTAGCCTTAATCCAATATGTGGGGCCGGCTGAGGTGAGCAACAACAAAAAAGATTCCAACAACGGCGATCCAAGTAACAATAGATGGCCAGATGTGGAAGTACAAGCACTCATAGGAGTAAGAACTGCGTTTGAACACAGGTTTGGTCATATGGGATCGAAAGGATCAATATGGGAGGAGATATCTGGAGCATTGCAGGGCATGGGATACAATCGTTCTGCGAAGAAGTGCAAGGAGAAATGGGAAAACATCAACAAGTACTATAGGAGGACAGTGGGGAGCGGCAAGAAACGGCCTGTTAATAGCAAAACTTGCCCTTACTTTGATGAATTGGACAATCTGTATAGAAATGGGTCCTTCTTCAAGGGCCTTGGGAAAGCATTGAGCAATACCAACAATGTTTCCATGAGTGAAGAAAAGGAGCAAGAATTCCTAAATGAGCACACTGAAGGCTTAAAGGATGAAAACTGGGATTTGGATTTCCTGCAGTTACAACATGCTGTAACAGATCAGGACCGTCCGATCTAA 1224 0.4755 MDSMNLLAGDRVSPFPDSGNLLFAAGLLSNHHSPQKLIPIRSIPPPPGFHANSPLHPPPPYTKSEDPSGSGSGHSSFPIGQEPGSSLDDVGNSSASTKEFESRKRRKKTARKMEDFAANLVKKMTEKQEKMHSELVEMIEKMEKERVEREEAWRREEMERIKQDEEARAAERSRSLALVSLIQKLLGHEIQIPPPAEGSGVREEEEVEVNNNNNNSQPLTHCMGSAEVNNNSLALIQYVGPAEVSNNKKDSNNGDPSNNRWPDVEVQALIGVRTAFEHRFGHMGSKGSIWEEISGALQGMGYNRSAKKCKEKWENINKYYRRTVGSGKKRPVNSKTCPYFDELDNLYRNGSFFKGLGKALSNTNNVSMSEEKEQEFLNEHTEGLKDENWDLDFLQLQHAVTDQDRPI* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3089 407 Coils Coil 125 152 - -
Mal4g3089 407 CDD GT1 259 323 - -
Mal4g3089 407 MobiDBLite consensus disorder prediction 39 64 - -
Mal4g3089 407 MobiDBLite consensus disorder prediction 37 111 - -
Mal4g3089 407 ProSiteProfiles Myb-like domain profile. 253 317 IPR001005 -
Mal4g3089 407 MobiDBLite consensus disorder prediction 65 97 - -
Mal4g3089 407 Gene3D - 261 322 - -
Mal4g3089 407 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 85 376 - -
Mal4g3089 407 Pfam Myb/SANT-like DNA-binding domain 259 346 IPR044822 -
Mal4g3089 407 PANTHER - 85 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3089 Mal-Chr4 91904760 91907308 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3089 104 351 Trihelix Transcription Factor Family AT5G47660 40.769 1.22e-52 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Mal4g3089 Myb_DNA-bind_4 1.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3089 - - mtr:MTR_2g026725 559.681