Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3078 ATGGCGACGATTGACGGCGAACCGGAGAAGAATGAATGGTCGGGATGTTTTTCTAAACCTCCAGCCGGGCTTAGAGGCTGCGGTCGATTGAGATTCGACCCTACTGTGAACCCACGGCCGTTTATGTTGAACGGAGTATGCTGCAGTTGTCCTCGTGTGATGCACACCGGTCATGGGGGTGCATATGTACCTCCCCATCGTAGAGCTGCTGCAAAGAGGAACAATGAAAATTCTGTTGTTCGTGTAAGCAACATCTCCAAGGACACAAGGGAGTCTGATTTGCTTGAGCTTTTCCGGCCTTTTGGTGTTGTCCATGTTTCCATGAATAAAAAGACCGGCATTGCCTTTGTTAACTTTGTCAACAGGGAAGATGCTCAGAGGGCTATTCACAAACTCAATGGTTATCTCATCCTTAGAGTTGAATGGGCGGGCCACCCCAACAACAACAACAACCTAAGTATTGGCTGA 468 0.485 MATIDGEPEKNEWSGCFSKPPAGLRGCGRLRFDPTVNPRPFMLNGVCCSCPRVMHTGHGGAYVPPHRRAAAKRNNENSVVRVSNISKDTRESDLLELFRPFGVVHVSMNKKTGIAFVNFVNREDAQRAIHKLNGYLILRVEWAGHPNNNNNLSIG* 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3078 155 CDD RRM_eIF3G_like 80 143 IPR034240 -
Mal4g3078 155 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 58 144 - -
Mal4g3078 155 Gene3D - 61 152 IPR012677 -
Mal4g3078 155 SUPERFAMILY RNA-binding domain, RBD 58 148 IPR035979 GO:0003676
Mal4g3078 155 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 80 137 IPR000504 GO:0003723
Mal4g3078 155 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 78 155 IPR000504 GO:0003723
Mal4g3078 155 SMART rrm1_1 79 141 IPR000504 GO:0003723
Mal4g3078 155 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G 58 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3078 Mal-Chr4 91611556 91612216 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3078 60 143 Eukaryotic Initiation Factors Gene Family AT3G11400 58.095 5.37e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3078 K03248 - jre:108998481 105.145