Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3075 ATGGACTCGAAAACTAGTGCTAGATCTCTCTCAAAACAACATCAGAAAACATCTGGGATTCAAACACCTGAGGCGAAAGACCTCAAGTTTTCTTCACTGTCGCTTCAAAAGACAGGGAAATCTGAGCCTGAGGATTTGTCTAAGTCTTTACAGAACACATCAAAGCAGAATAATGGGGAGATTTATGAAAGCAAGAGGTTTGGTGCTTCAAATCAAAAGGGTTCGGTTGATTCATTGAGTAGTAAATTTGGTTCTGGTGCTTCCTCATCTGCAGTTAATGTGAACATAGGCTCACAAGAAAGCTCTATCGATCAAGACAAAAAGACATCAGAATATGGAAGTGTGAAAAACAGTTCTGTTTCTGCCAAAGCTAGCGACGGGGCCAGCAGTATTGCAAAGACAAGTGGTAGTGCTAAGATCAGTGATCGAGCTGATTTTGTTGAGAGTGGTAAGAGCAGTATTTGCAGAGGAAGTACAAGCAGCGATGTCAGTGATGAGAGTACTTGTAGTAGCTTTAGTAGCAGCGTAAACAAGCCTCACAAGGCAAATGACATGAGATGGGAAGCAATCCAAGTGGTTAGAACTAGAGATGGAGCATTGGGTTTAGGCCACTTTAGGCTTCTCAAGAGGTTGGGTTGTGGAGATATCGGCAGTGTTTACCTATCTGAGTTGAGTGGAACCAAATGTTACTTTGCAATGAAGGTGATGGACAAAGGGTCGTTAGCAAGTCGTAAGAAGTTACTTCGTGCTCAGACGGAACGGGAAATTCTTCAGTCACTTGACCACCCGTTTCTCCCAACTTTGTACACTCATTTTGAGACGGAGAAATTTTCGTGCTTGGTGATGGAATTCTGCCCGGGTGGAGACCTCCATACTCTTCGGCAGAAACAACCAGGGAAGCACTTTCCTGAGCAGGCAGTAAAATTTTATGTGGCAGAGGTCCTACTGGCGATGGAGTACCTCCACATGCTCGGGATTGTATACCGTGATCTTAAGCCAGAAAATGTCCTCGTTAGGGATGATGGACATATTATGCTCTCCGACTTTGACCTTTCCCTCCGATGTGCTGTTAGTCCAACCCTTGTTAAATCCTCGTCCATTGATTCAGAGCCTTTAAGAAAGAACACTGGTTACTGTGCTCAGCCTGCATGTATTGAGCCGCCATCCTGCATTCAGCCATCCTGTGTTGCTCCTACCTCGTGTTTTTCACCCCGGCTCTTTTCTAGCAAATCAAAGAAAGAACGGAAGCCCAAAACTGATCTTGGCAATCAAGTTAGTCCTCTACCTGAGCTCATTGCAGAGCCCACCGACGCTCGGTCTATGTCATTTGTCGGAACCCACGAATACCTGGCACCTGAGATAATCAAGGGTGAAGGTCACGGCAGTGCAGTTGATTGGTGGACTTATGGAATCTTTCTATACGAGTTGTTGTTTGGCAAAACTCCGTTTAAGGGATCCGGGAACCGAGCCACGCTGTTTAACGTGGTAGGTCAGCCCCTACGATTTCCTGAAGCACCTGTTGTTAGCTTTGCAGCAAGGGATCTTATAAGGGGTTTGCTTGTAAAGGAACCTCAGCACAGGTTGGCATATAAAAGAGGCGCAACTGAGATTAAGCAGCATCCCTTTTTCGAAGGTGTGAATTGGGCGTTGATCCGATGTGCTACCCCGCCCGAGATTCCAAAGGCTGTTGAGTTTGAGAAGATACCTTCCCCGGCTGCCTCGTCCGCCGGCGAAAAGGCTGTTGTCAACCCCATGTCAACAACGGCTGCTAATCAGAAAGGTTCTGATAATTATCTAGAGTTTGATTTCTTCTAG 1815 0.4595 MDSKTSARSLSKQHQKTSGIQTPEAKDLKFSSLSLQKTGKSEPEDLSKSLQNTSKQNNGEIYESKRFGASNQKGSVDSLSSKFGSGASSSAVNVNIGSQESSIDQDKKTSEYGSVKNSSVSAKASDGASSIAKTSGSAKISDRADFVESGKSSICRGSTSSDVSDESTCSSFSSSVNKPHKANDMRWEAIQVVRTRDGALGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETEKFSCLVMEFCPGGDLHTLRQKQPGKHFPEQAVKFYVAEVLLAMEYLHMLGIVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLVKSSSIDSEPLRKNTGYCAQPACIEPPSCIQPSCVAPTSCFSPRLFSSKSKKERKPKTDLGNQVSPLPELIAEPTDARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTYGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPEAPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCATPPEIPKAVEFEKIPSPAASSAGEKAVVNPMSTTAANQKGSDNYLEFDFF* 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3075 604 SUPERFAMILY Protein kinase-like (PK-like) 179 565 IPR011009 -
Mal4g3075 604 MobiDBLite consensus disorder prediction 112 134 - -
Mal4g3075 604 Gene3D Transferase(Phosphotransferase) domain 1 437 561 - -
Mal4g3075 604 PANTHER FLIPPASE KINASE 1-RELATED 3 604 - -
Mal4g3075 604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 326 338 IPR008271 GO:0004672|GO:0006468
Mal4g3075 604 ProSiteProfiles Protein kinase domain profile. 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3075 604 SMART serkin_6 205 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3075 604 Gene3D Transferase(Phosphotransferase) domain 1 289 356 - -
Mal4g3075 604 Gene3D Phosphorylase Kinase; domain 1 203 288 - -
Mal4g3075 604 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 3 604 - -
Mal4g3075 604 Pfam Protein kinase domain 440 543 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3075 604 Pfam Protein kinase domain 206 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3075 604 MobiDBLite consensus disorder prediction 10 103 - -
Mal4g3075 604 CDD STKc_phototropin_like 204 561 - -
Mal4g3075 604 MobiDBLite consensus disorder prediction 1 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3075 Mal-Chr4 91570654 91573407 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3075 42 604 AGC Kinase Gene Family AT5G47750 77.798 0.0 867
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mal4g3075 Pkinase 2.6e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3075 K08286 - gmx:100798088 1026.54