Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3049 ATGTATCATCCTACAAGTGTTCCTGATTCGAGTTTAATTGGAAGCAATTCATTAGTTCATGGTCAACACATAGATTCTGGTAGGAGCACAATGGATCCTGGTAATGGAGGAAACAGTCTTGCCAACAACTCTAATCTCAACTCAAAGCAACGTTTGCGTTGGACACATGAGCTACATGAACGCTTTGTTGATGCCGTGGCTCAACTTGGTGGCCCTGATCGTGCCACACCCAAAGGTGTCCTCAGAGTTATGGGTGTACAAGGCTTAACCATTTACCATGTTAAGAGCCATTTGCAGAAATACCGACTAGCAAAATACTTACCTGACTGCTCATCCGATGAGGGGAAAAAGACCGACAAGAAAGAAACGGGGGATATGCTTTCCAATCTAGATGGTTCATCGTCGGGGATGCAGATTACTGAAGCACTAAAGCTTCAAATGGAGGTGCAGAAGCGACTACATGAACAATTGGAGGTGCAGAGACAACTACAATTAAGGATCGAAGCTCAGGGAAAATATTTGAAAAAGATAATTGAAGAGCAACAGCGACTCAGCGGGGTTCTTTCAGAAGCACCTGGCTCTGGTGTTGCAGCACCAACTCCAGGAGATATGTGCCAACAGGAACTCGACAATAAGACTGAACCAGCAACCCCTGACCCAGAAAAAGCTGCTAAAGAACATGCACCAGCAAAGAGTCTTTCAGTTGAATCCTTTTCATCTCACCAAGAACCGATGACACCGGATTCTGGTTGCCAAGTCGGTTCTCCTGCTGACAGTCCCAACGGCGAGAGATCGACCAAAAAGCAACGAGTAAGCGTGGAAGGAGTGTATTCGAAATCAGACATGGTGCTTCCACATCAGATACTGGAGTCAAGCATGCCATCCTACCAACAACCAACCACTGTTTTCCTTACTCGAGATCACTTTGATCCTTCTTTAGGTATGTCTACAGGAAGTGGTGAGGAATTGGATAAGCTTGGTGGCAGAAATATGTGA 996 0.4548 MYHPTSVPDSSLIGSNSLVHGQHIDSGRSTMDPGNGGNSLANNSNLNSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDCSSDEGKKTDKKETGDMLSNLDGSSSGMQITEALKLQMEVQKRLHEQLEVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSEAPGSGVAAPTPGDMCQQELDNKTEPATPDPEKAAKEHAPAKSLSVESFSSHQEPMTPDSGCQVGSPADSPNGERSTKKQRVSVEGVYSKSDMVLPHQILESSMPSYQQPTTVFLTRDHFDPSLGMSTGSGEELDKLGGRNM* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3049 331 MobiDBLite consensus disorder prediction 189 279 - -
Mal4g3049 331 SUPERFAMILY Homeodomain-like 48 103 IPR009057 -
Mal4g3049 331 MobiDBLite consensus disorder prediction 307 331 - -
Mal4g3049 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 3 323 IPR044848 GO:0003700
Mal4g3049 331 Pfam MYB-CC type transfactor, LHEQLE motif 137 183 IPR025756 -
Mal4g3049 331 MobiDBLite consensus disorder prediction 1 46 - -
Mal4g3049 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Mal4g3049 331 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7 3 323 - -
Mal4g3049 331 Coils Coil 140 160 - -
Mal4g3049 331 MobiDBLite consensus disorder prediction 233 262 - -
Mal4g3049 331 MobiDBLite consensus disorder prediction 214 229 - -
Mal4g3049 331 MobiDBLite consensus disorder prediction 111 133 - -
Mal4g3049 331 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Mal4g3049 331 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Mal4g3049 331 MobiDBLite consensus disorder prediction 111 126 - -
Mal4g3049 331 Gene3D - 48 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3049 Mal-Chr4 90980284 90982257 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3049 84 331 G2-like Transcription Factor Family AT2G01060 62.403 3.54e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Mal4g3049 Myb_DNA-binding 2.2e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3049 - - gmx:100786925 519.62