Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3004 ATGGGTGAAAGAATTCTAGTGTTCCTACTCTTCCTTTTCAGTTATTTGTTGGTTGTTGTGGTAGCAAAAACATCAAATGATGATTACCTTGCACTTTTGACTATAAAGTTTCAGTGGAAGAATACGCCACCGAGTTGGGAGGGTTCGCAGGATCCTTGTGGCGAACGTTGGGAAGGCATTGAGTGCATCAATTCGCGCGTTACCACCATATCATTGGTAAGCATGGATTTGTCTGGCCAGCTTTCAGGAGATATTGGATTACTATCTGAATTGCGGATTTTGGATCTATCCTACAATAAGAAGTTAACAGGACCGCTTCCCGCTGAAATTGGAAACTTGAAAAAGCTGACAAACTTGCAGCTTATTAACTGCGGTTTCTCCGGTCCTATCCCAGATACTATAGGAAGTTTGCCACGGCTTGTATTCCTATCTTTGAATTCTAATAGATTTATTGGGAGAATTCCAGCTACTATTGGTAATCTCTCAAATATTTATTGGCTAGACTTAGCAGATAACCAGCTTGAAGGTTCCATCCCAATATCTAATGGAACTACTCCTGGTCTTGATATGCTTCACAAAACAAAACACTTTCATTTTGGGAAGAATAAGCTTTCAGGAAATATTCCACCTCAACTTTTTAGCTCTGATATGTCTTTGATACATGTGCTTTTTGAAAGCAACCAATTTACTGGCATCATACCATCTACACTTGGACTTGTACAGAATCTGGAAGTGGTGCGCTTGGATAACAACTTTTTACGTGGTCCTTTGCCTCAAAATATCAACAATCTTACAAAAGTTAGAGAATTGTTCCTATCCAAGAATCGCCTAACTGGTTCCTTGCCAAACCTTACTGGAATGAATGTCCTCAGCTACCTGGATGTGAGCAATAACAGTTTCGATCGATCAGACTTTCCACCATGGTTATCAACTCTACAGTCTCTAACAACAATAATGATGGAGGATATACAACTTCAAGGACCTATTCCTGTTTCTTTGTTCAGCCTGGTACAGTTACAGACAGTGATAATGAGAAACAATCATCTGAATGGCACTTTAGATATTGGTACAGCCGTTAGTGACCAACTGGGAGTCCTTGATTTCCAGACTAATTTGATTGAAGAATTTGAACCACAAATTGATGTCTCTAAAGTGGAGATAATACTTGTGAATAATCCAATTTGCCAAGAAAGTGGAGTTAAACGAACTTACTGCTCGATTACAAAAACCAACGACACATATAAAACTCCGCTAAATAACTGTGTTCCGGTTGAATGCAACAAAAATCAGATATTAAGTCCAAAATGCAAATGTGCATACCCTTATACAGGAACTTTCACTCTTAGAGCTCCTGCTTTCTCAGACTTGGGAAACAAGACAGTGTTTGCAATGCTGGAATTTACTCTGATGGAATCTTTTAGACTTCATGAGAAACCTGTGGATTCAGTTTCTTTAAGCAATCCAAGGAAGAATGCATATCACTATCTTGATTTGAGTTTAGAAATATTTCCATCAGGCCAAGATTATTTCAATAGAACCGGGATTTCCGGCATAGGATTTATGCTTAGCAACCAAACATACAAGCCTCCTGCTGAAATTTTTGGACCATTTTATTTCATTGCTGATAAGTATGAACACTATCTGAATGATTCAGTTATAGAAGAAGGTCCTGTGAAATCTGGTAAATCTTCAAATATTGGCATCATAGCTGGAGCTGCTGGTGGCGGTTGTGTCCTGGTTGTGTTATTACTATTTGCAGTTGTTTACGGTTTCCGCCAAAAGAACAAGGCAAGAAAAGCAGCTAAGAAAAGCAATCTTTTTGAACAATGGGGCCCGGATGAGAGCAATAGTAGCATCCCACAGTTAAAAGGAGCAAGGCGCTTCACTTTCGAAGAGATTCAGAACTACACCAAATATTTTGCACAAGCCTATTATATAGGATCTGGGGGTTATGGGAAGGTTTATAGGGGAACTCTTCTCAATGGACAACTAATTGCAGTAAAAAGAGCTCAAAAGGAATCAATCCAAGGAGTGCAGGAATTCAAAACAGAGATTGAACTTCTATCAAGGGTCCACCATAAAAATCTTGTTAGCCTTATTGGTTTCTGCTTTGAGCAAGGAGAACAAATACTGGTTTATGAGTATGTTGTAAATGGTACTTTAACAGATGCTCTTTCAGGGAAGTCAGGAATTAGATTGGACTGGATTAGAAGGCTAAAAATAGCCCTTGGTGCTGCTAGGGGGTTGGATTATCTTCATGAACAAGCCAATCCTCCTATCATACATAGAGACGTCAAATCGACAAACATTTTACTCGACGAACGCTTGAATGCTAAAGTATCTGATTTTGGTCTCTCCAAGCCTTTGGGTGATGGTGGAAAAGGTTATATTACCACTCAAGTTAAAGGGACAATGGGATACTTGGATCCAGAGTATTATATGACACAACAATTGACTGAGAAGAGCGATGTTTATAGCTTTGGAGTGCTAATGTTGGAGTTGATAACTGCAAGAAGGCCAATAGAAAGAGGGAAATATATTGTGAAAGTGGTTAAGACTGCTACTGACAAGACAAAAGAATTATATGGTCTTAAGGAAATCATTGATCCTGTCATAGATTTTAAGGCATCATTGAACAGTTTTGAAAAGTTTATTGATCTTGCAATGAAATGTGTTGAAGATTCAAGTTCAAATAGGCCTTCAATGAATTATGCATTTAAAGAAATTGAAAACATGTTGCTGTTGGCTGGCGCAAACCCTAATGCTGAATCAGCATCTACTTCATCTAGTTATAATGCAAGTGGGAATTCTTTGCATCCTTATGAAAATGAGTACTTTGATTCAAGTGTGATACTTCCACGTGCGTAA 2868 0.3856 MGERILVFLLFLFSYLLVVVVAKTSNDDYLALLTIKFQWKNTPPSWEGSQDPCGERWEGIECINSRVTTISLVSMDLSGQLSGDIGLLSELRILDLSYNKKLTGPLPAEIGNLKKLTNLQLINCGFSGPIPDTIGSLPRLVFLSLNSNRFIGRIPATIGNLSNIYWLDLADNQLEGSIPISNGTTPGLDMLHKTKHFHFGKNKLSGNIPPQLFSSDMSLIHVLFESNQFTGIIPSTLGLVQNLEVVRLDNNFLRGPLPQNINNLTKVRELFLSKNRLTGSLPNLTGMNVLSYLDVSNNSFDRSDFPPWLSTLQSLTTIMMEDIQLQGPIPVSLFSLVQLQTVIMRNNHLNGTLDIGTAVSDQLGVLDFQTNLIEEFEPQIDVSKVEIILVNNPICQESGVKRTYCSITKTNDTYKTPLNNCVPVECNKNQILSPKCKCAYPYTGTFTLRAPAFSDLGNKTVFAMLEFTLMESFRLHEKPVDSVSLSNPRKNAYHYLDLSLEIFPSGQDYFNRTGISGIGFMLSNQTYKPPAEIFGPFYFIADKYEHYLNDSVIEEGPVKSGKSSNIGIIAGAAGGGCVLVVLLLFAVVYGFRQKNKARKAAKKSNLFEQWGPDESNSSIPQLKGARRFTFEEIQNYTKYFAQAYYIGSGGYGKVYRGTLLNGQLIAVKRAQKESIQGVQEFKTEIELLSRVHHKNLVSLIGFCFEQGEQILVYEYVVNGTLTDALSGKSGIRLDWIRRLKIALGAARGLDYLHEQANPPIIHRDVKSTNILLDERLNAKVSDFGLSKPLGDGGKGYITTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELITARRPIERGKYIVKVVKTATDKTKELYGLKEIIDPVIDFKASLNSFEKFIDLAMKCVEDSSSNRPSMNYAFKEIENMLLLAGANPNAESASTSSSYNASGNSLHPYENEYFDSSVILPRA* 956
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3004 955 ProSiteProfiles Protein kinase domain profile. 640 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3004 955 Gene3D Transferase(Phosphotransferase) domain 1 716 929 - -
Mal4g3004 955 SMART serkin_6 640 915 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3004 955 CDD STKc_IRAK 646 912 - -
Mal4g3004 955 SUPERFAMILY L domain-like 53 422 - -
Mal4g3004 955 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 5 945 - -
Mal4g3004 955 ProSitePatterns Serine/Threonine protein kinases active-site signature. 760 772 IPR008271 GO:0004672|GO:0006468
Mal4g3004 955 Gene3D Ribonuclease Inhibitor 184 392 IPR032675 -
Mal4g3004 955 SUPERFAMILY Protein kinase-like (PK-like) 613 906 IPR011009 -
Mal4g3004 955 Pfam Protein kinase domain 645 906 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g3004 955 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Mal4g3004 955 ProSitePatterns Protein kinases ATP-binding region signature. 646 668 IPR017441 GO:0005524
Mal4g3004 955 Gene3D Phosphorylase Kinase; domain 1 612 715 - -
Mal4g3004 955 Gene3D Ribonuclease Inhibitor 25 183 IPR032675 -
Mal4g3004 955 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 945 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3004 Mal-Chr4 90191536 90197028 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3004 8 955 Receptor kinase-like Gene Family AT5G49760 55.882 0.0 984
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Mal4g3004 Pkinase 9.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3004 - - gmx:100780344 1398.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3004 4 90191536 90197028 Mal4g3004 4 90191536 90197028 ECH