Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g3001 ATGGCAAACGAGAACAGAGAAGAGGTGGTATGCGTAACCGGAGCAAACGGATTCATCGGATCATGGCTAGTTCACACCCTATTATCAAAACAAAACCCACATTACAAAATCCACGCCACAATCTTCCCCAATTCCGACCCATCCCATCTCTTCACTCTCCACCCCGACGCCCAATCCCGTATCACCATCTTCCCCGTTAATATCCTTGACTCCACCGCCGTCTCAAACGCCATCAGCGGTTGCTCCGGCGTCTTCCACGTGGCCTCGCCATGCACTCTCGAAGATCCAACCGACCCACAAAAGGAACTTCTAGAACCCGCTGTACAAGGAACACTGAATGTTCTAGAAGCAGCGAAGCGCGTGGGTGTCAAGCGCGTGGTTCTCACCTCATCTATTTCCGCCATGGTACCAAACCCTAACTGGCCGCAAAACAAGGCAGTGGATGAATCTTCATGGACTGATGTTGAGTACTGTAAGTCAAGGGGGAAGTGGTATCCGGTGTCGAAGACAGAGGCGGAGAAGGGGGCGTGGGAGTTTCGTGAGAAACACGGTGGTGTGGATGTGGTGGCGGTTCATCCCGGGACTTGTTTGGGGCCGTTGCTTCAGAACGAAATGAATGCGAGTTCCGCGGTGTTGCAGAGATTGATGATGGGGGAGAAGGATACGCAGGAGTGTTATTGGTTGGGTGCTGTTCATGTTAAAGATGTTGCGAAAGCTCATGTTTTGGTTTATGAGATTCCAACTGCTGCTGGTAGATATCTTTGTGTTAATGGTATCTATCAGTTTTCTAGTTTTGCTAAAATTGTCTCTGAATTGTACCCTGAGTTTCCTATTTACAGTTTCCCAGATGAAACTCAACCTGGTTTGGCACCATGTAAAGATGCAGCAAAGAGGCTAATAGATTTGGGCTTAGTCTTCACACCCATTCAAGATGCTATTAGAGAAGCAGCAGAAAGTCTTATGGCCAAAGGCTTCCTGCAGCCAACACCTTCACTGAATTAG 1002 0.487 MANENREEVVCVTGANGFIGSWLVHTLLSKQNPHYKIHATIFPNSDPSHLFTLHPDAQSRITIFPVNILDSTAVSNAISGCSGVFHVASPCTLEDPTDPQKELLEPAVQGTLNVLEAAKRVGVKRVVLTSSISAMVPNPNWPQNKAVDESSWTDVEYCKSRGKWYPVSKTEAEKGAWEFREKHGGVDVVAVHPGTCLGPLLQNEMNASSAVLQRLMMGEKDTQECYWLGAVHVKDVAKAHVLVYEIPTAAGRYLCVNGIYQFSSFAKIVSELYPEFPIYSFPDETQPGLAPCKDAAKRLIDLGLVFTPIQDAIREAAESLMAKGFLQPTPSLN* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g3001 333 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 315 - -
Mal4g3001 333 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 319 IPR036291 -
Mal4g3001 333 Pfam NAD dependent epimerase/dehydratase family 10 247 IPR001509 -
Mal4g3001 333 CDD FR_SDR_e 10 304 - -
Mal4g3001 333 Gene3D - 2 332 - -
Mal4g3001 333 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 8 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g3001 Mal-Chr4 90181113 90184914 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g3001 7 326 Monolignol Biosynthesis Gene Families AT2G02400 64.688 2.06e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g3001 - - vra:106775739 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal4g3001 4 90181113 90184914 Mal4g3001 4 90181113 90184914 ECH