Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal4g2987 ATGGAACGTCGCGTTGGGAATAAGTTTCGTGTTGGTCGTAAGATCGGTAGTGGCTCATTTGGAGAGATCTATTTAGGTACTAACATTGTAACTAATGAAGATGTTGCAATTAAGCTTGAAAATGTCAGGACAAAGAATCCTCAGTTGCTGTATGAGTCGAAGTTGTACAGAATGCTGCAGGGAGAGCCTGGGATTCCAAATATTAAATGGTTTGGAGTGGAGGGAGATTATAATGTTCTAGTAATGGATCTGCTTGGACCTAGTCTTGAAGAGATGTTTAACTTCTGTAGTAGAAAGCTCTCGCTAAAGACAGTTCTCATGCTTGCTGAGCAAATGATCAAACGTGTTGAGTTTGTTCATTCTAAATCACTTCTTCATCGGGATATCAAACCAGATAATTTCCTCATGGGCTTGGGAAAGCGGGAAAACCAGGTTTACTGCATTGATTTTGGTCTAGCGAAGAAATATAGAGATAGTTCAACCCACCAACACATTCCTTACAGGGAAAATAAGAATTTGACTGGAACTGCAAGATATGCCAGCATGAATACCCACCTTGGCATTGAGCAAAGTCGAAGAGATGATTTAGAATCTGTTGGTTATGTCTTGATGTACTTCCTGAGAGGAAGTCTTCCTTGGCAAGGACTTCAAGCACGAACCAAGAGAGAAAAGTACGAGAAAATCAGCGAAAAGAAGGTTTCTACCTCGATTGAGGCCTTGTGTCGAGGTTATCCAACAGAGTTTGCATCATACTTCCATTATTGCCGGTCATTAAGATTTGATGATAGGCCAGATTATGCATACCTCAAAAGAATATTTCGCGACCTGTTCATTCGCGAAGGATTCCAGTCTGATTACGTCTTTGATTGGACTATCTTAAAGTATCAGCAATCACAACTAATCACTCCTCCAGCACGTGCTATTGGGCCTAGTGCTGGAATTAGCTCTGGAATCCCTCCTGCTATGACTAATGCTAATAGACACACAGGAAGGGAAGAAGGGCGTCATTCTGGTTTGGTTTCAGTAAACTCTTCAAGGCGAAGAATGTCGGGACCCATTTTAAATTCTGTAAATATTTCAAAGCAGAAAAATCCAGTCCCTAGTGATGCTGCTATTAGTAGGGATGTTATGTTATCAAATGCCAATGTCTTGGGCGAGTCAAGTGGATCAAGGCGACTTGCTGGTAGTAGTAGCCGCAATGCATTTGGTGGTGCTGATCCGAATTTTCGTGCTCGTGTTACTGAAGATATCAATGGAAAAGCAATCATAAATTCAAGTGGACAAAGAAGTTCACAAATTGGACCTTCAGATCCAAAGAGAGTAACATCTAAAATGAGTTCTCATGTCAAGAATTATGAATCTGCAATCAAGGGCATGGAGGGTTTGAAATTAAAAAATGTCGACGCCCATCAATAA 1416 0.4096 MERRVGNKFRVGRKIGSGSFGEIYLGTNIVTNEDVAIKLENVRTKNPQLLYESKLYRMLQGEPGIPNIKWFGVEGDYNVLVMDLLGPSLEEMFNFCSRKLSLKTVLMLAEQMIKRVEFVHSKSLLHRDIKPDNFLMGLGKRENQVYCIDFGLAKKYRDSSTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESVGYVLMYFLRGSLPWQGLQARTKREKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDRPDYAYLKRIFRDLFIREGFQSDYVFDWTILKYQQSQLITPPARAIGPSAGISSGIPPAMTNANRHTGREEGRHSGLVSVNSSRRRMSGPILNSVNISKQKNPVPSDAAISRDVMLSNANVLGESSGSRRLAGSSSRNAFGGADPNFRARVTEDINGKAIINSSGQRSSQIGPSDPKRVTSKMSSHVKNYESAIKGMEGLKLKNVDAHQ* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal4g2987 471 Gene3D Transferase(Phosphotransferase) domain 1 1 307 - -
Mal4g2987 471 Pfam Protein kinase domain 10 224 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2987 471 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mal4g2987 471 MobiDBLite consensus disorder prediction 387 407 - -
Mal4g2987 471 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mal4g2987 471 MobiDBLite consensus disorder prediction 425 446 - -
Mal4g2987 471 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2987 471 PANTHER CASEIN KINASE-RELATED 1 446 - -
Mal4g2987 471 SMART serkin_6 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal4g2987 471 PANTHER CASEIN KINASE I-LIKE 1 446 - -
Mal4g2987 471 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Mal4g2987 471 MobiDBLite consensus disorder prediction 387 403 - -
Mal4g2987 471 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal4g2987 Mal-Chr4 89799885 89807823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal4g2987 7 213 CBL-interacting serine-threonine protein kinases AT2G25090 29.018 1.08e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mal4g2987 Pkinase 4.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal4g2987 K02218 - gmx:100786777 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal5g5158 5 125454904 125461056 Mal4g2987 4 89799885 89807823 PCT