Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Mal4g2984 | ATGAGAAGCCGTGACCACACAGTCTCAGCAACACACGGAGACATGGACCAGAATACTAGGGACATTATCATGCGTGAATTCCGTTCTGGTTCTTCCCGTGTATTGATTACTACTGATCTTCTGGCTCGTGGTATTGATGTGCAGCAAGTGTCTTTAGTTATCAATTATGATCTCCCAACACAGCCTGAAAACTACCTCCATCGTATTGGTCGTAGTGGAAGGTTTGGTAGGAAAGGTGTTGCTATTAACTTCGTCACAACTGATGACGAAAGAATGCTGAGTGACATCCAGAAGTTCTACAATGTGTTAATTGAGGAGCTGCCTTCAAATGTTGCTGAACTTCTGTGA | 348 | 0.4368 | MRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTDDERMLSDIQKFYNVLIEELPSNVAELL* | 116 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Mal4g2984 | 115 | CDD | SF2_C_DEAD | 1 | 85 | - | - | |
| Mal4g2984 | 115 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 1 | 115 | IPR001650 | - | |
| Mal4g2984 | 115 | SMART | helicmild6 | 1 | 76 | IPR001650 | - | |
| Mal4g2984 | 115 | PANTHER | EUKARYOTIC INITIATION FACTOR 4A-2 | 1 | 115 | - | - | |
| Mal4g2984 | 115 | PANTHER | RNA HELICASE | 1 | 115 | - | - | |
| Mal4g2984 | 115 | Pfam | Helicase conserved C-terminal domain | 6 | 76 | IPR001650 | - | |
| Mal4g2984 | 115 | Gene3D | - | 1 | 114 | IPR027417 | - | |
| Mal4g2984 | 115 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 2 | 111 | IPR027417 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Mal4g2984 | Mal-Chr4 | 89753433 | 89753780 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Mal4g2984 | 1 | 115 | Eukaryotic Initiation Factors Gene Family | AT1G72730 | 91.304 | 1.00e-74 | 225 |